Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 FAM197Y4-202ENST00000622692 608 ntBASIC20.88■□□□□ 0.93
SCML2Q9UQR0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCML2Q9UQR0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCML2Q9UQR0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SCML2Q9UQR0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCML2Q9UQR0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 FEM1AP1-201ENST00000431297 1995 ntBASIC20.87■□□□□ 0.93
SCML2Q9UQR0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 AC239809.2-201ENST00000415381 517 ntBASIC20.87■□□□□ 0.93
SCML2Q9UQR0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCML2Q9UQR0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 PRKY-204ENST00000533551 1019 ntBASIC20.86■□□□□ 0.93
SCML2Q9UQR0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 AP006294.2-201ENST00000641667 209 ntBASIC20.86■□□□□ 0.93
SCML2Q9UQR0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCML2Q9UQR0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 KRASP1-201ENST00000407852 552 ntBASIC20.85■□□□□ 0.93
SCML2Q9UQR0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SCML2Q9UQR0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCML2Q9UQR0 GABARAPL3-202ENST00000624044 1851 ntBASIC20.84■□□□□ 0.93
SCML2Q9UQR0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCML2Q9UQR0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCML2Q9UQR0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms