Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 AC142381.3-201ENST00000568208 1670 ntBASIC8.32□□□□□ -1.08
MACF1Q9UPN3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 AC243591.1-201ENST00000452967 1364 ntBASIC8.32□□□□□ -1.08
MACF1Q9UPN3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC8.32□□□□□ -1.08
MACF1Q9UPN3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 HLA-G-202ENST00000376815 851 ntBASIC8.31□□□□□ -1.08
MACF1Q9UPN3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 AC012645.4-201ENST00000610691 1061 ntBASIC8.31□□□□□ -1.08
MACF1Q9UPN3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 KRT16P1-201ENST00000399124 1418 ntBASIC8.31□□□□□ -1.08
MACF1Q9UPN3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 AL121772.3-201ENST00000610840 674 ntBASIC8.31□□□□□ -1.08
MACF1Q9UPN3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 AL023973.1-201ENST00000624619 620 ntBASIC8.31□□□□□ -1.08
MACF1Q9UPN3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 AC083906.6-201ENST00000641366 219 ntBASIC8.31□□□□□ -1.08
MACF1Q9UPN3 AC079781.4-201ENST00000641908 219 ntBASIC8.31□□□□□ -1.08
MACF1Q9UPN3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC8.31□□□□□ -1.08
MACF1Q9UPN3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 GPX1P2-201ENST00000429271 606 ntBASIC8.3□□□□□ -1.08
MACF1Q9UPN3 MOK-208ENST00000519058 917 ntTSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 KRT16P6-202ENST00000425692 1426 ntBASIC8.3□□□□□ -1.08
MACF1Q9UPN3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 MIR3687-2-201ENST00000577708 61 ntBASIC8.3□□□□□ -1.08
MACF1Q9UPN3 MIR3687-1-201ENST00000614492 61 ntBASIC8.3□□□□□ -1.08
MACF1Q9UPN3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 AC010653.2-201ENST00000623505 997 ntBASIC8.3□□□□□ -1.08
MACF1Q9UPN3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 AC022494.1-201ENST00000466044 728 ntBASIC8.3□□□□□ -1.08
MACF1Q9UPN3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC8.3□□□□□ -1.08
MACF1Q9UPN3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms