Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 CNN2P6-201ENST00000439038 900 ntBASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 TERF1P5-201ENST00000477545 1207 ntBASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.2■□□□□ 0.66
CNOT11Q9UKZ1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 CROCCP5-201ENST00000436658 830 ntBASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNOT11Q9UKZ1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 AC007322.1-201ENST00000426983 750 ntBASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNOT11Q9UKZ1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 AC092720.2-201ENST00000602388 1665 ntBASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 RBM17P2-201ENST00000616397 1405 ntBASIC19.17■□□□□ 0.66
CNOT11Q9UKZ1 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNOT11Q9UKZ1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms