Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HACD3Q9P035 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.23■□□□□ 0.83
HACD3Q9P035 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HACD3Q9P035 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HACD3Q9P035 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.23■□□□□ 0.83
HACD3Q9P035 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HACD3Q9P035 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.22■□□□□ 0.83
HACD3Q9P035 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.22■□□□□ 0.83
HACD3Q9P035 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.22■□□□□ 0.83
HACD3Q9P035 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
HACD3Q9P035 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.22■□□□□ 0.83
HACD3Q9P035 AL162377.1-201ENST00000618844 1793 ntBASIC20.22■□□□□ 0.83
HACD3Q9P035 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HACD3Q9P035 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HACD3Q9P035 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.22■□□□□ 0.83
HACD3Q9P035 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.22■□□□□ 0.83
HACD3Q9P035 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.22■□□□□ 0.83
HACD3Q9P035 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.22■□□□□ 0.83
HACD3Q9P035 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HACD3Q9P035 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HACD3Q9P035 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HACD3Q9P035 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.22■□□□□ 0.83
HACD3Q9P035 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
HACD3Q9P035 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
HACD3Q9P035 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HACD3Q9P035 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
HACD3Q9P035 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HACD3Q9P035 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.21■□□□□ 0.83
HACD3Q9P035 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HACD3Q9P035 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.21■□□□□ 0.83
HACD3Q9P035 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.21■□□□□ 0.83
HACD3Q9P035 DUSP5P2-201ENST00000426873 1033 ntBASIC20.21■□□□□ 0.83
HACD3Q9P035 AC073210.2-201ENST00000430369 194 ntBASIC20.21■□□□□ 0.83
HACD3Q9P035 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.21■□□□□ 0.83
HACD3Q9P035 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
HACD3Q9P035 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.21■□□□□ 0.83
HACD3Q9P035 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.21■□□□□ 0.83
HACD3Q9P035 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HACD3Q9P035 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
HACD3Q9P035 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.2■□□□□ 0.82
HACD3Q9P035 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HACD3Q9P035 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HACD3Q9P035 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
HACD3Q9P035 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.2■□□□□ 0.82
HACD3Q9P035 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HACD3Q9P035 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.2■□□□□ 0.82
HACD3Q9P035 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.2■□□□□ 0.82
HACD3Q9P035 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HACD3Q9P035 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.2■□□□□ 0.82
HACD3Q9P035 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HACD3Q9P035 AC091874.3-201ENST00000512672 1195 ntBASIC20.2■□□□□ 0.82
HACD3Q9P035 AC142086.2-201ENST00000569753 217 ntBASIC20.2■□□□□ 0.82
HACD3Q9P035 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.2■□□□□ 0.82
HACD3Q9P035 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.2■□□□□ 0.82
HACD3Q9P035 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HACD3Q9P035 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HACD3Q9P035 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
HACD3Q9P035 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HACD3Q9P035 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HACD3Q9P035 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HACD3Q9P035 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HACD3Q9P035 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.19■□□□□ 0.82
HACD3Q9P035 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HACD3Q9P035 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HACD3Q9P035 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.19■□□□□ 0.82
HACD3Q9P035 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HACD3Q9P035 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HACD3Q9P035 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HACD3Q9P035 ID1-201ENST00000376105 1233 ntBASIC20.19■□□□□ 0.82
HACD3Q9P035 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.19■□□□□ 0.82
HACD3Q9P035 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.19■□□□□ 0.82
HACD3Q9P035 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.19■□□□□ 0.82
HACD3Q9P035 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.19■□□□□ 0.82
HACD3Q9P035 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.19■□□□□ 0.82
HACD3Q9P035 AC133041.1-202ENST00000642053 222 ntBASIC20.19■□□□□ 0.82
HACD3Q9P035 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HACD3Q9P035 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms