Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.45■■□□□ 1.5
ECHDC1Q9NTX5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
ECHDC1Q9NTX5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ECHDC1Q9NTX5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 AC112907.3-201ENST00000577781 2400 ntBASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ECHDC1Q9NTX5 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 AL390719.1-204ENST00000412397 1219 ntBASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 KRT18P6-201ENST00000555540 1265 ntBASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ECHDC1Q9NTX5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 AC006557.6-201ENST00000623071 864 ntBASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 KRT16P6-202ENST00000425692 1426 ntBASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ECHDC1Q9NTX5 TCF3P1-201ENST00000423021 1937 ntBASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
ECHDC1Q9NTX5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 AL691432.2-201ENST00000607222 2038 ntBASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 RNA5SP413-201ENST00000516373 109 ntBASIC24.4■■□□□ 1.5
ECHDC1Q9NTX5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms