Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 RARRES2P10-201ENST00000564312 460 ntBASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 MIR4785-201ENST00000585005 73 ntBASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 AC113410.3-201ENST00000623366 203 ntBASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 AC011484.1-201ENST00000377652 1995 ntBASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM9SF3Q9HD45 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 FAM210CP-201ENST00000445714 574 ntBASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 PRKY-204ENST00000533551 1019 ntBASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM9SF3Q9HD45 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM9SF3Q9HD45 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TM9SF3Q9HD45 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TM9SF3Q9HD45 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TM9SF3Q9HD45 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TM9SF3Q9HD45 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.02■□□□□ 0.79
TM9SF3Q9HD45 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 AF106564.1-201ENST00000607058 2553 ntBASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.01■□□□□ 0.79
TM9SF3Q9HD45 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF3Q9HD45 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TM9SF3Q9HD45 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20■□□□□ 0.79
TM9SF3Q9HD45 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms