Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
SCAF1Q9H7N4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC29.7■■■□□ 2.34
SCAF1Q9H7N4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC29.7■■■□□ 2.34
SCAF1Q9H7N4 PNMA6B-201ENST00000538162 1200 ntBASIC29.7■■■□□ 2.34
SCAF1Q9H7N4 AKR1B10P2-201ENST00000577332 927 ntBASIC29.7■■■□□ 2.34
SCAF1Q9H7N4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC29.7■■■□□ 2.34
SCAF1Q9H7N4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
SCAF1Q9H7N4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SCAF1Q9H7N4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC29.69■■■□□ 2.34
SCAF1Q9H7N4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC29.69■■■□□ 2.34
SCAF1Q9H7N4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SCAF1Q9H7N4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC29.69■■■□□ 2.34
SCAF1Q9H7N4 AL355075.4-201ENST00000554988 638 ntBASIC29.69■■■□□ 2.34
SCAF1Q9H7N4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 KRT17P1-201ENST00000399211 1546 ntBASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
SCAF1Q9H7N4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 AC087742.1-201ENST00000575880 1738 ntBASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 AC098818.2-201ENST00000564925 2320 ntBASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
SCAF1Q9H7N4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 PKD1P6-201ENST00000343738 4769 ntBASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 RN7SL602P-201ENST00000578326 324 ntBASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC29.66■■■□□ 2.34
SCAF1Q9H7N4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 AC092368.3-202ENST00000574180 1591 ntBASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 AL355472.2-201ENST00000422958 438 ntBASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SCAF1Q9H7N4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 AC092473.1-201ENST00000441098 221 ntBASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 SOX15-203ENST00000570788 1093 ntBASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 AP001412.1-201ENST00000608405 714 ntBASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
SCAF1Q9H7N4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC29.64■■■□□ 2.33
SCAF1Q9H7N4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
SCAF1Q9H7N4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC29.64■■■□□ 2.33
SCAF1Q9H7N4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
SCAF1Q9H7N4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
SCAF1Q9H7N4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC29.64■■■□□ 2.33
SCAF1Q9H7N4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
SCAF1Q9H7N4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SCAF1Q9H7N4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SCAF1Q9H7N4 TPM4P1-201ENST00000436100 807 ntBASIC29.63■■■□□ 2.33
SCAF1Q9H7N4 HES2-205ENST00000487437 968 ntTSL 3 BASIC29.63■■■□□ 2.33
SCAF1Q9H7N4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC29.63■■■□□ 2.33
SCAF1Q9H7N4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms