Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MTND2P15-201ENST00000418575 892 ntBASIC22.05■■□□□ 1.12
RNF39Q9H2S5 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 AL355994.1-201ENST00000424379 260 ntBASIC22.05■■□□□ 1.12
RNF39Q9H2S5 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 AC108673.2-201ENST00000608909 565 ntBASIC22.05■■□□□ 1.12
RNF39Q9H2S5 AC006557.6-201ENST00000623071 864 ntBASIC22.05■■□□□ 1.12
RNF39Q9H2S5 MIR2861-201ENST00000636310 90 ntBASIC22.05■■□□□ 1.12
RNF39Q9H2S5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF39Q9H2S5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 AC026310.3-201ENST00000625186 2373 ntBASIC22.04■■□□□ 1.12
RNF39Q9H2S5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 KRT17P3-201ENST00000420566 1262 ntBASIC22.04■■□□□ 1.12
RNF39Q9H2S5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 SETP8-201ENST00000435341 628 ntBASIC22.04■■□□□ 1.12
RNF39Q9H2S5 MTCYBP11-201ENST00000447254 1109 ntBASIC22.04■■□□□ 1.12
RNF39Q9H2S5 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 AC105233.3-201ENST00000531125 744 ntBASIC22.04■■□□□ 1.12
RNF39Q9H2S5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 AL109741.3-201ENST00000561748 592 ntBASIC22.04■■□□□ 1.12
RNF39Q9H2S5 RN7SL48P-201ENST00000579283 293 ntBASIC22.04■■□□□ 1.12
RNF39Q9H2S5 AL359736.2-201ENST00000621992 437 ntBASIC22.04■■□□□ 1.12
RNF39Q9H2S5 PLK5-205ENST00000642079 1969 ntBASIC22.04■■□□□ 1.12
RNF39Q9H2S5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF39Q9H2S5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 AC240504.1-201ENST00000395709 845 ntBASIC22.03■■□□□ 1.12
RNF39Q9H2S5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 ZNF826P-202ENST00000542380 1067 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF39Q9H2S5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 POM121L13P-201ENST00000422362 380 ntBASIC22.02■■□□□ 1.12
RNF39Q9H2S5 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 AC005829.2-201ENST00000571422 1056 ntBASIC22.02■■□□□ 1.12
RNF39Q9H2S5 RN7SL471P-201ENST00000580476 299 ntBASIC22.02■■□□□ 1.12
RNF39Q9H2S5 AC069544.1-201ENST00000609399 999 ntBASIC22.02■■□□□ 1.12
RNF39Q9H2S5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 AC106795.5-201ENST00000623288 454 ntBASIC22.02■■□□□ 1.12
RNF39Q9H2S5 KRT8P36-201ENST00000489121 1440 ntBASIC22.02■■□□□ 1.12
RNF39Q9H2S5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RNF39Q9H2S5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.02■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms