Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LSG1Q9H089 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
LSG1Q9H089 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LSG1Q9H089 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LSG1Q9H089 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
LSG1Q9H089 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.95■■□□□ 1.43
LSG1Q9H089 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
LSG1Q9H089 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LSG1Q9H089 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.95■■□□□ 1.42
LSG1Q9H089 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
LSG1Q9H089 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.95■■□□□ 1.42
LSG1Q9H089 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
LSG1Q9H089 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LSG1Q9H089 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.95■■□□□ 1.42
LSG1Q9H089 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LSG1Q9H089 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
LSG1Q9H089 TSPY6P-201ENST00000448518 926 ntBASIC23.95■■□□□ 1.42
LSG1Q9H089 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.95■■□□□ 1.42
LSG1Q9H089 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.95■■□□□ 1.42
LSG1Q9H089 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LSG1Q9H089 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.95■■□□□ 1.42
LSG1Q9H089 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LSG1Q9H089 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LSG1Q9H089 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.95■■□□□ 1.42
LSG1Q9H089 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LSG1Q9H089 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
LSG1Q9H089 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LSG1Q9H089 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.94■■□□□ 1.42
LSG1Q9H089 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
LSG1Q9H089 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
LSG1Q9H089 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LSG1Q9H089 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LSG1Q9H089 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LSG1Q9H089 HES2-205ENST00000487437 968 ntTSL 3 BASIC23.94■■□□□ 1.42
LSG1Q9H089 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
LSG1Q9H089 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
LSG1Q9H089 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.94■■□□□ 1.42
LSG1Q9H089 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.94■■□□□ 1.42
LSG1Q9H089 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LSG1Q9H089 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LSG1Q9H089 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
LSG1Q9H089 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC23.94■■□□□ 1.42
LSG1Q9H089 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LSG1Q9H089 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LSG1Q9H089 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LSG1Q9H089 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LSG1Q9H089 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LSG1Q9H089 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.93■■□□□ 1.42
LSG1Q9H089 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
LSG1Q9H089 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
LSG1Q9H089 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.93■■□□□ 1.42
LSG1Q9H089 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.93■■□□□ 1.42
LSG1Q9H089 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.93■■□□□ 1.42
LSG1Q9H089 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.93■■□□□ 1.42
LSG1Q9H089 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.93■■□□□ 1.42
LSG1Q9H089 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.93■■□□□ 1.42
LSG1Q9H089 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LSG1Q9H089 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.93■■□□□ 1.42
LSG1Q9H089 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.93■■□□□ 1.42
LSG1Q9H089 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.93■■□□□ 1.42
LSG1Q9H089 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LSG1Q9H089 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
LSG1Q9H089 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
LSG1Q9H089 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.92■■□□□ 1.42
LSG1Q9H089 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC23.92■■□□□ 1.42
LSG1Q9H089 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
LSG1Q9H089 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
LSG1Q9H089 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
LSG1Q9H089 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LSG1Q9H089 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
LSG1Q9H089 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LSG1Q9H089 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
LSG1Q9H089 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.92■■□□□ 1.42
LSG1Q9H089 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.92■■□□□ 1.42
LSG1Q9H089 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.92■■□□□ 1.42
LSG1Q9H089 AL158211.5-201ENST00000623583 2518 ntBASIC23.92■■□□□ 1.42
LSG1Q9H089 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.92■■□□□ 1.42
LSG1Q9H089 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LSG1Q9H089 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LSG1Q9H089 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LSG1Q9H089 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LSG1Q9H089 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LSG1Q9H089 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.91■■□□□ 1.42
LSG1Q9H089 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
LSG1Q9H089 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LSG1Q9H089 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LSG1Q9H089 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.91■■□□□ 1.42
LSG1Q9H089 DUSP5P2-201ENST00000426873 1033 ntBASIC23.91■■□□□ 1.42
LSG1Q9H089 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LSG1Q9H089 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LSG1Q9H089 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.91■■□□□ 1.42
LSG1Q9H089 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.91■■□□□ 1.42
LSG1Q9H089 AC092118.2-201ENST00000613495 667 ntBASIC23.91■■□□□ 1.42
LSG1Q9H089 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.91■■□□□ 1.42
LSG1Q9H089 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.91■■□□□ 1.42
LSG1Q9H089 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
LSG1Q9H089 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
LSG1Q9H089 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
LSG1Q9H089 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.91■■□□□ 1.42
LSG1Q9H089 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms