Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC063924.1-201ENST00000546680 673 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 DPPA2P4-201ENST00000563717 878 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 RN7SL716P-201ENST00000580539 268 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC245036.5-201ENST00000596330 847 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AL606834.3-201ENST00000602615 496 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AL592221.1-201ENST00000605266 382 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AL583856.2-201ENST00000606298 543 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 ZNF663P-202ENST00000641770 1131 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC119674.1-209ENST00000642031 997 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 AC008514.2-201ENST00000522096 1337 ntBASIC12.35□□□□□ -0.43
KRTAP3-3Q9BYR6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 UBE2V1P10-201ENST00000414685 269 ntBASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AL034428.1-201ENST00000425939 1101 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 MTCO2P19-201ENST00000427513 598 ntBASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AC087672.1-201ENST00000479876 766 ntBASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AP002360.3-201ENST00000607673 710 ntBASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AP000254.1-201ENST00000609934 520 ntBASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AL031587.3-201ENST00000609976 814 ntBASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AC068944.2-201ENST00000610373 403 ntBASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AC026367.2-201ENST00000610630 553 ntBASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AC105052.3-201ENST00000639209 1130 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 AC009120.6-201ENST00000616116 1460 ntBASIC12.34□□□□□ -0.43
KRTAP3-3Q9BYR6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
KRTAP3-3Q9BYR6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 PPP1R2P10-201ENST00000393023 595 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 LRRC72-202ENST00000401542 1000 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 TRIM60P5Y-201ENST00000413946 574 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 TRIM60P17-201ENST00000415181 719 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 PPP1R2P4-201ENST00000424051 595 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 SERBP1P6-201ENST00000507707 932 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AC092868.3-201ENST00000560515 784 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 ZNF546-204ENST00000596894 714 ntTSL 3 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AC097358.2-201ENST00000607541 1159 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 Metazoa_SRP.206-201ENST00000612004 332 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AL512506.1-201ENST00000613918 449 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AL356585.3-201ENST00000625196 1017 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 AC116618.1-201ENST00000634617 774 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 WHAMMP2-203ENST00000563942 1603 ntBASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC12.33□□□□□ -0.44
KRTAP3-3Q9BYR6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AL390237.1-201ENST00000404226 1415 ntBASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 MMP26-202ENST00000380390 1189 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 MIR762-201ENST00000390236 83 ntBASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC12.32□□□□□ -0.44
KRTAP3-3Q9BYR6 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms