Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
SMOQ99835 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.06■□□□□ 0.96
SMOQ99835 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMOQ99835 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMOQ99835 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SMOQ99835 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SMOQ99835 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SMOQ99835 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SMOQ99835 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMOQ99835 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMOQ99835 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMOQ99835 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.05■□□□□ 0.96
SMOQ99835 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SMOQ99835 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.05■□□□□ 0.96
SMOQ99835 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SMOQ99835 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.05■□□□□ 0.96
SMOQ99835 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMOQ99835 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SMOQ99835 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
SMOQ99835 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.05■□□□□ 0.96
SMOQ99835 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMOQ99835 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.05■□□□□ 0.96
SMOQ99835 AL162377.1-201ENST00000618844 1793 ntBASIC21.05■□□□□ 0.96
SMOQ99835 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SMOQ99835 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.04■□□□□ 0.96
SMOQ99835 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMOQ99835 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SMOQ99835 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SMOQ99835 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SMOQ99835 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMOQ99835 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.04■□□□□ 0.96
SMOQ99835 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SMOQ99835 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.04■□□□□ 0.96
SMOQ99835 AC142381.4-202ENST00000563973 229 ntBASIC21.04■□□□□ 0.96
SMOQ99835 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMOQ99835 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMOQ99835 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMOQ99835 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.04■□□□□ 0.96
SMOQ99835 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.04■□□□□ 0.96
SMOQ99835 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMOQ99835 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.04■□□□□ 0.96
SMOQ99835 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SMOQ99835 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMOQ99835 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SMOQ99835 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMOQ99835 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SMOQ99835 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SMOQ99835 C1QBPP2-201ENST00000528754 825 ntBASIC21.03■□□□□ 0.96
SMOQ99835 AL359736.2-201ENST00000621992 437 ntBASIC21.03■□□□□ 0.96
SMOQ99835 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMOQ99835 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMOQ99835 LINC01006-201ENST00000333319 2292 ntBASIC21.03■□□□□ 0.96
SMOQ99835 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMOQ99835 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SMOQ99835 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
SMOQ99835 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.02■□□□□ 0.96
SMOQ99835 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SMOQ99835 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SMOQ99835 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.02■□□□□ 0.96
SMOQ99835 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.02■□□□□ 0.96
SMOQ99835 AL158047.1-201ENST00000445918 881 ntBASIC21.02■□□□□ 0.96
SMOQ99835 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.02■□□□□ 0.96
SMOQ99835 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.02■□□□□ 0.96
SMOQ99835 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.02■□□□□ 0.96
SMOQ99835 RPPH1-201ENST00000516869 333 ntBASIC21.02■□□□□ 0.96
SMOQ99835 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.02■□□□□ 0.96
SMOQ99835 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SMOQ99835 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SMOQ99835 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.02■□□□□ 0.96
SMOQ99835 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMOQ99835 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SMOQ99835 BX119927.1-201ENST00000636596 1552 ntBASIC21.02■□□□□ 0.95
SMOQ99835 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.01■□□□□ 0.95
SMOQ99835 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMOQ99835 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMOQ99835 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.01■□□□□ 0.95
SMOQ99835 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMOQ99835 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMOQ99835 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SMOQ99835 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMOQ99835 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMOQ99835 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMOQ99835 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMOQ99835 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SMOQ99835 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMOQ99835 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21■□□□□ 0.95
SMOQ99835 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SMOQ99835 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms