Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDCA3Q99618 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.97■□□□□ 0.95
CDCA3Q99618 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA3Q99618 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA3Q99618 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA3Q99618 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.96■□□□□ 0.95
CDCA3Q99618 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA3Q99618 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.96■□□□□ 0.95
CDCA3Q99618 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.96■□□□□ 0.95
CDCA3Q99618 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.96■□□□□ 0.95
CDCA3Q99618 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CDCA3Q99618 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA3Q99618 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDCA3Q99618 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDCA3Q99618 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA3Q99618 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA3Q99618 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.95■□□□□ 0.94
CDCA3Q99618 BX664615.1-201ENST00000443558 458 ntBASIC20.95■□□□□ 0.94
CDCA3Q99618 B3GAT3P1-201ENST00000471720 806 ntBASIC20.95■□□□□ 0.94
CDCA3Q99618 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.95■□□□□ 0.94
CDCA3Q99618 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDCA3Q99618 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.95■□□□□ 0.94
CDCA3Q99618 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDCA3Q99618 GUSBP5-202ENST00000510805 1989 ntBASIC20.95■□□□□ 0.94
CDCA3Q99618 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
CDCA3Q99618 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA3Q99618 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDCA3Q99618 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDCA3Q99618 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.94■□□□□ 0.94
CDCA3Q99618 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA3Q99618 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA3Q99618 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA3Q99618 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA3Q99618 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CDCA3Q99618 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.94■□□□□ 0.94
CDCA3Q99618 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA3Q99618 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA3Q99618 KRT8P17-201ENST00000453110 1448 ntBASIC20.94■□□□□ 0.94
CDCA3Q99618 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDCA3Q99618 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CDCA3Q99618 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA3Q99618 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CDCA3Q99618 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA3Q99618 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CDCA3Q99618 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA3Q99618 ECEL1P2-202ENST00000465689 757 ntBASIC20.93■□□□□ 0.94
CDCA3Q99618 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.93■□□□□ 0.94
CDCA3Q99618 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CDCA3Q99618 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.93■□□□□ 0.94
CDCA3Q99618 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.93■□□□□ 0.94
CDCA3Q99618 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA3Q99618 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA3Q99618 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CDCA3Q99618 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDCA3Q99618 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.92■□□□□ 0.94
CDCA3Q99618 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDCA3Q99618 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA3Q99618 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.92■□□□□ 0.94
CDCA3Q99618 AC097488.1-201ENST00000507834 756 ntBASIC20.92■□□□□ 0.94
CDCA3Q99618 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 AC091076.1-201ENST00000610741 619 ntBASIC20.92■□□□□ 0.94
CDCA3Q99618 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CDCA3Q99618 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA3Q99618 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDCA3Q99618 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDCA3Q99618 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
CDCA3Q99618 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.92■□□□□ 0.94
CDCA3Q99618 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA3Q99618 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
CDCA3Q99618 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CDCA3Q99618 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA3Q99618 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CDCA3Q99618 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA3Q99618 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA3Q99618 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA3Q99618 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.91■□□□□ 0.94
CDCA3Q99618 AK4P3-201ENST00000418260 669 ntBASIC20.91■□□□□ 0.94
CDCA3Q99618 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA3Q99618 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA3Q99618 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CDCA3Q99618 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.91■□□□□ 0.94
CDCA3Q99618 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.91■□□□□ 0.94
CDCA3Q99618 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.91■□□□□ 0.94
CDCA3Q99618 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDCA3Q99618 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.91■□□□□ 0.94
CDCA3Q99618 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.91■□□□□ 0.94
CDCA3Q99618 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.91■□□□□ 0.94
CDCA3Q99618 AC244015.2-201ENST00000616358 1861 ntBASIC20.91■□□□□ 0.94
CDCA3Q99618 AC131212.4-201ENST00000623606 975 ntBASIC20.91■□□□□ 0.94
CDCA3Q99618 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms