Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.51■□□□□ 0.71
PKP4Q99569 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PKP4Q99569 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP4Q99569 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PKP4Q99569 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
PKP4Q99569 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
PKP4Q99569 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP4Q99569 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.5■□□□□ 0.71
PKP4Q99569 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP4Q99569 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.5■□□□□ 0.71
PKP4Q99569 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PKP4Q99569 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.5■□□□□ 0.71
PKP4Q99569 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PKP4Q99569 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PKP4Q99569 AL031963.3-201ENST00000606441 850 ntBASIC19.5■□□□□ 0.71
PKP4Q99569 AC083880.1-201ENST00000608266 535 ntBASIC19.5■□□□□ 0.71
PKP4Q99569 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP4Q99569 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.5■□□□□ 0.71
PKP4Q99569 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP4Q99569 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PKP4Q99569 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.5■□□□□ 0.71
PKP4Q99569 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PKP4Q99569 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PKP4Q99569 BX119927.1-201ENST00000636596 1552 ntBASIC19.49■□□□□ 0.71
PKP4Q99569 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.49■□□□□ 0.71
PKP4Q99569 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PKP4Q99569 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.49■□□□□ 0.71
PKP4Q99569 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.49■□□□□ 0.71
PKP4Q99569 AC023632.3-201ENST00000521633 145 ntBASIC19.49■□□□□ 0.71
PKP4Q99569 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.49■□□□□ 0.71
PKP4Q99569 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.49■□□□□ 0.71
PKP4Q99569 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
PKP4Q99569 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PKP4Q99569 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 KRT8P20-201ENST00000423953 1409 ntBASIC19.49■□□□□ 0.71
PKP4Q99569 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PKP4Q99569 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PKP4Q99569 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKP4Q99569 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PKP4Q99569 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.48■□□□□ 0.71
PKP4Q99569 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PKP4Q99569 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.48■□□□□ 0.71
PKP4Q99569 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.48■□□□□ 0.71
PKP4Q99569 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.48■□□□□ 0.71
PKP4Q99569 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.48■□□□□ 0.71
PKP4Q99569 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.48■□□□□ 0.71
PKP4Q99569 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.48■□□□□ 0.71
PKP4Q99569 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PKP4Q99569 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.48■□□□□ 0.71
PKP4Q99569 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PKP4Q99569 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PKP4Q99569 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PKP4Q99569 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.47■□□□□ 0.71
PKP4Q99569 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PKP4Q99569 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PKP4Q99569 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PKP4Q99569 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP4Q99569 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP4Q99569 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PKP4Q99569 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP4Q99569 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.47■□□□□ 0.71
PKP4Q99569 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PKP4Q99569 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP4Q99569 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP4Q99569 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP4Q99569 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP4Q99569 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PKP4Q99569 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.47■□□□□ 0.71
PKP4Q99569 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKP4Q99569 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PKP4Q99569 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.46■□□□□ 0.71
PKP4Q99569 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.46■□□□□ 0.71
PKP4Q99569 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP4Q99569 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKP4Q99569 HLA-G-202ENST00000376815 851 ntBASIC19.46■□□□□ 0.71
PKP4Q99569 HLA-G-203ENST00000376818 1127 ntBASIC19.46■□□□□ 0.71
PKP4Q99569 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.46■□□□□ 0.71
PKP4Q99569 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.46■□□□□ 0.71
PKP4Q99569 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.46■□□□□ 0.71
PKP4Q99569 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms