Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 AC004264.1-201ENST00000608354 794 ntBASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CSMD1Q96PZ7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 FAM207BP-201ENST00000447172 505 ntBASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 AC128688.1-201ENST00000487626 519 ntBASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 PCED1CP-201ENST00000419887 785 ntBASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 RNF152P1-201ENST00000397754 604 ntBASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSMD1Q96PZ7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 AC245052.3-201ENST00000450182 901 ntBASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 AC116407.4-201ENST00000623319 1061 ntBASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 AC139530.1-201ENST00000575312 1977 ntBASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.12■□□□□ 0.33
CSMD1Q96PZ7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSMD1Q96PZ7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 NIFKP9-201ENST00000419265 221 ntBASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 RN7SL510P-201ENST00000581311 263 ntBASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 AC130371.2-201ENST00000619443 611 ntBASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 AC139530.3-201ENST00000620344 690 ntBASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 IER3-202ENST00000376377 1350 ntBASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 AC026271.3-201ENST00000571884 352 ntBASIC17.1■□□□□ 0.33
CSMD1Q96PZ7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms