Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RPRD1AQ96P16 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPRD1AQ96P16 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
RPRD1AQ96P16 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RPRD1AQ96P16 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
RPRD1AQ96P16 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.64■□□□□ 0.9
RPRD1AQ96P16 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 ITM2C-210ENST00000620962 501 ntBASIC20.64■□□□□ 0.89
RPRD1AQ96P16 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RPRD1AQ96P16 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 AC092667.1-201ENST00000434301 2586 ntBASIC20.63■□□□□ 0.89
RPRD1AQ96P16 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 KRT17P3-201ENST00000420566 1262 ntBASIC20.63■□□□□ 0.89
RPRD1AQ96P16 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 AC120498.8-201ENST00000614275 531 ntBASIC20.63■□□□□ 0.89
RPRD1AQ96P16 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RPRD1AQ96P16 AL157384.1-201ENST00000445995 2473 ntBASIC20.63■□□□□ 0.89
RPRD1AQ96P16 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 POM121L13P-201ENST00000422362 380 ntBASIC20.62■□□□□ 0.89
RPRD1AQ96P16 AC128676.1-201ENST00000454392 318 ntBASIC20.62■□□□□ 0.89
RPRD1AQ96P16 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 GABARAPL3-202ENST00000624044 1851 ntBASIC20.62■□□□□ 0.89
RPRD1AQ96P16 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
RPRD1AQ96P16 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 TMEM191A-211ENST00000637163 1067 ntBASIC20.61■□□□□ 0.89
RPRD1AQ96P16 AC073648.6-201ENST00000641589 218 ntBASIC20.61■□□□□ 0.89
RPRD1AQ96P16 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RPRD1AQ96P16 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RPRD1AQ96P16 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms