Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CALR3Q96L12 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
CALR3Q96L12 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.15■□□□□ 0.98
CALR3Q96L12 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.15■□□□□ 0.98
CALR3Q96L12 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.15■□□□□ 0.98
CALR3Q96L12 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CALR3Q96L12 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.15■□□□□ 0.98
CALR3Q96L12 AC013268.1-206ENST00000638368 961 ntBASIC21.15■□□□□ 0.98
CALR3Q96L12 AC112229.1-201ENST00000639295 961 ntBASIC21.15■□□□□ 0.98
CALR3Q96L12 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CALR3Q96L12 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CALR3Q96L12 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CALR3Q96L12 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CALR3Q96L12 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CALR3Q96L12 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CALR3Q96L12 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CALR3Q96L12 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.14■□□□□ 0.98
CALR3Q96L12 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CALR3Q96L12 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CALR3Q96L12 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CALR3Q96L12 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CALR3Q96L12 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CALR3Q96L12 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CALR3Q96L12 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CALR3Q96L12 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.14■□□□□ 0.97
CALR3Q96L12 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CALR3Q96L12 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CALR3Q96L12 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CALR3Q96L12 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.13■□□□□ 0.97
CALR3Q96L12 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.13■□□□□ 0.97
CALR3Q96L12 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CALR3Q96L12 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CALR3Q96L12 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.13■□□□□ 0.97
CALR3Q96L12 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 AC098818.2-201ENST00000564925 2320 ntBASIC21.13■□□□□ 0.97
CALR3Q96L12 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.13■□□□□ 0.97
CALR3Q96L12 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.13■□□□□ 0.97
CALR3Q96L12 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.13■□□□□ 0.97
CALR3Q96L12 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CALR3Q96L12 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CALR3Q96L12 KRT16P6-202ENST00000425692 1426 ntBASIC21.12■□□□□ 0.97
CALR3Q96L12 KRT8P17-201ENST00000453110 1448 ntBASIC21.12■□□□□ 0.97
CALR3Q96L12 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
CALR3Q96L12 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.12■□□□□ 0.97
CALR3Q96L12 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.12■□□□□ 0.97
CALR3Q96L12 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.12■□□□□ 0.97
CALR3Q96L12 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.12■□□□□ 0.97
CALR3Q96L12 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 TREX1-205ENST00000625293 1783 ntBASIC21.12■□□□□ 0.97
CALR3Q96L12 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.12■□□□□ 0.97
CALR3Q96L12 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CALR3Q96L12 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CALR3Q96L12 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.11■□□□□ 0.97
CALR3Q96L12 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CALR3Q96L12 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CALR3Q96L12 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CALR3Q96L12 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CALR3Q96L12 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CALR3Q96L12 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CALR3Q96L12 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.11■□□□□ 0.97
CALR3Q96L12 KRT18P61-201ENST00000585825 1298 ntBASIC21.11■□□□□ 0.97
CALR3Q96L12 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CALR3Q96L12 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CALR3Q96L12 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CALR3Q96L12 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms