Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 AL031963.3-201ENST00000606441 850 ntBASIC21.73■■□□□ 1.07
PGBD4Q96DM1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 AC124283.5-201ENST00000624661 1809 ntBASIC21.73■■□□□ 1.07
PGBD4Q96DM1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PGBD4Q96DM1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 NBPF21P-201ENST00000425093 1451 ntBASIC21.72■■□□□ 1.07
PGBD4Q96DM1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.72■■□□□ 1.07
PGBD4Q96DM1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 PTBP1P-201ENST00000554374 1601 ntBASIC21.72■■□□□ 1.07
PGBD4Q96DM1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PGBD4Q96DM1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PGBD4Q96DM1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.7■■□□□ 1.07
PGBD4Q96DM1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 AL121603.2-201ENST00000557373 2117 ntBASIC21.7■■□□□ 1.06
PGBD4Q96DM1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 TSPY7P-201ENST00000431358 1114 ntBASIC21.7■■□□□ 1.06
PGBD4Q96DM1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 KRT16P5-201ENST00000455284 522 ntBASIC21.7■■□□□ 1.06
PGBD4Q96DM1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 AC073912.3-201ENST00000624414 853 ntBASIC21.7■■□□□ 1.06
PGBD4Q96DM1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.7■■□□□ 1.06
PGBD4Q96DM1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGBD4Q96DM1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PGBD4Q96DM1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PGBD4Q96DM1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
PGBD4Q96DM1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PGBD4Q96DM1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PGBD4Q96DM1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.69■■□□□ 1.06
PGBD4Q96DM1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms