Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.07■□□□□ 0.48
SNRNP40Q96DI7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SNRNP40Q96DI7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNRNP40Q96DI7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SNRNP40Q96DI7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNRNP40Q96DI7 AC079834.2-201ENST00000609776 1949 ntBASIC18.07■□□□□ 0.48
SNRNP40Q96DI7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SNRNP40Q96DI7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.07■□□□□ 0.48
SNRNP40Q96DI7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.07■□□□□ 0.48
SNRNP40Q96DI7 AC073508.3-201ENST00000619697 1419 ntBASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 GUSBP5-202ENST00000510805 1989 ntBASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 NIFKP9-201ENST00000419265 221 ntBASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SNRNP40Q96DI7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 HLA-G-202ENST00000376815 851 ntBASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 HLA-G-203ENST00000376818 1127 ntBASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 SLC25A3P1-201ENST00000443844 931 ntBASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 KRT16P1-201ENST00000399124 1418 ntBASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.05■□□□□ 0.48
SNRNP40Q96DI7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.04■□□□□ 0.48
SNRNP40Q96DI7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SNRNP40Q96DI7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SNRNP40Q96DI7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SNRNP40Q96DI7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.03■□□□□ 0.48
SNRNP40Q96DI7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms