Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LETM1P2-201ENST00000597330 2178 ntBASIC17.67■□□□□ 0.42
RFT1Q96AA3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFT1Q96AA3 HCG11-201ENST00000411553 5696 ntBASIC17.67■□□□□ 0.42
RFT1Q96AA3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.67■□□□□ 0.42
RFT1Q96AA3 AC005332.7-201ENST00000614046 2005 ntBASIC17.67■□□□□ 0.42
RFT1Q96AA3 AC092720.2-201ENST00000602388 1665 ntBASIC17.67■□□□□ 0.42
RFT1Q96AA3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RFT1Q96AA3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFT1Q96AA3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RFT1Q96AA3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RFT1Q96AA3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RFT1Q96AA3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.65■□□□□ 0.42
RFT1Q96AA3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.65■□□□□ 0.42
RFT1Q96AA3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RFT1Q96AA3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RFT1Q96AA3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.65■□□□□ 0.42
RFT1Q96AA3 POU5F1P4-201ENST00000413175 1085 ntBASIC17.65■□□□□ 0.42
RFT1Q96AA3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.65■□□□□ 0.42
RFT1Q96AA3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RFT1Q96AA3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RFT1Q96AA3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.64■□□□□ 0.42
RFT1Q96AA3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.64■□□□□ 0.42
RFT1Q96AA3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RFT1Q96AA3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 AC120498.9-201ENST00000339021 3867 ntBASIC17.64■□□□□ 0.41
RFT1Q96AA3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.64■□□□□ 0.41
RFT1Q96AA3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RFT1Q96AA3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.64■□□□□ 0.41
RFT1Q96AA3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFT1Q96AA3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.64■□□□□ 0.41
RFT1Q96AA3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFT1Q96AA3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFT1Q96AA3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.64■□□□□ 0.41
RFT1Q96AA3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
RFT1Q96AA3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RFT1Q96AA3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RFT1Q96AA3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RFT1Q96AA3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RFT1Q96AA3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.63■□□□□ 0.41
RFT1Q96AA3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RFT1Q96AA3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.63■□□□□ 0.41
RFT1Q96AA3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms