Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
UBE2E3Q969T4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
UBE2E3Q969T4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.27■□□□□ 0.67
UBE2E3Q969T4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBE2E3Q969T4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 KRT16P6-202ENST00000425692 1426 ntBASIC19.26■□□□□ 0.67
UBE2E3Q969T4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
UBE2E3Q969T4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 GPX1P1-201ENST00000388829 606 ntBASIC19.25■□□□□ 0.67
UBE2E3Q969T4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 TCF3P1-201ENST00000423021 1937 ntBASIC19.25■□□□□ 0.67
UBE2E3Q969T4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBE2E3Q969T4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 MIPEPP3-201ENST00000412105 444 ntBASIC19.24■□□□□ 0.67
UBE2E3Q969T4 NCF1B-203ENST00000435988 1254 ntBASIC19.24■□□□□ 0.67
UBE2E3Q969T4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.24■□□□□ 0.67
UBE2E3Q969T4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 AC092118.2-201ENST00000613495 667 ntBASIC19.23■□□□□ 0.67
UBE2E3Q969T4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBE2E3Q969T4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.22■□□□□ 0.67
UBE2E3Q969T4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
UBE2E3Q969T4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms