Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
RTF1Q92541 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RTF1Q92541 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC26.19■■□□□ 1.78
RTF1Q92541 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.19■■□□□ 1.78
RTF1Q92541 AL121906.2-201ENST00000621597 723 ntBASIC26.19■■□□□ 1.78
RTF1Q92541 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTF1Q92541 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RTF1Q92541 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RTF1Q92541 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTF1Q92541 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RTF1Q92541 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTF1Q92541 PALM-208ENST00000592155 2272 ntTSL 4 BASIC26.18■■□□□ 1.78
RTF1Q92541 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTF1Q92541 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTF1Q92541 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTF1Q92541 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.18■■□□□ 1.78
RTF1Q92541 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
RTF1Q92541 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.18■■□□□ 1.78
RTF1Q92541 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC26.18■■□□□ 1.78
RTF1Q92541 Z99916.2-201ENST00000604037 246 ntBASIC26.18■■□□□ 1.78
RTF1Q92541 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC26.18■■□□□ 1.78
RTF1Q92541 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.18■■□□□ 1.78
RTF1Q92541 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTF1Q92541 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTF1Q92541 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTF1Q92541 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTF1Q92541 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RTF1Q92541 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTF1Q92541 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.17■■□□□ 1.78
RTF1Q92541 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC26.17■■□□□ 1.78
RTF1Q92541 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.17■■□□□ 1.78
RTF1Q92541 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RTF1Q92541 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RTF1Q92541 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.16■■□□□ 1.78
RTF1Q92541 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTF1Q92541 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC26.16■■□□□ 1.78
RTF1Q92541 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTF1Q92541 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTF1Q92541 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTF1Q92541 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC26.16■■□□□ 1.78
RTF1Q92541 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RTF1Q92541 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC26.16■■□□□ 1.78
RTF1Q92541 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.16■■□□□ 1.78
RTF1Q92541 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC26.16■■□□□ 1.78
RTF1Q92541 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC26.16■■□□□ 1.78
RTF1Q92541 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
RTF1Q92541 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC26.15■■□□□ 1.78
RTF1Q92541 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.15■■□□□ 1.78
RTF1Q92541 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
RTF1Q92541 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RTF1Q92541 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RTF1Q92541 PNN-205ENST00000556530 601 ntTSL 2 BASIC26.15■■□□□ 1.78
RTF1Q92541 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC26.15■■□□□ 1.78
RTF1Q92541 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTF1Q92541 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RTF1Q92541 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTF1Q92541 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC26.14■■□□□ 1.78
RTF1Q92541 ME2-216ENST00000639850 2331 ntTSL 5 BASIC26.14■■□□□ 1.78
RTF1Q92541 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTF1Q92541 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTF1Q92541 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
RTF1Q92541 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.14■■□□□ 1.78
RTF1Q92541 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.14■■□□□ 1.78
RTF1Q92541 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC26.14■■□□□ 1.78
RTF1Q92541 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC26.14■■□□□ 1.78
RTF1Q92541 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC26.14■■□□□ 1.78
RTF1Q92541 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RTF1Q92541 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
RTF1Q92541 Six3os1_6.1-201ENST00000620790 196 ntBASIC26.14■■□□□ 1.78
RTF1Q92541 CABP2-204ENST00000636477 941 ntTSL 5 BASIC26.14■■□□□ 1.78
RTF1Q92541 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
RTF1Q92541 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC26.14■■□□□ 1.77
RTF1Q92541 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RTF1Q92541 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RTF1Q92541 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
RTF1Q92541 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC26.13■■□□□ 1.77
RTF1Q92541 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RTF1Q92541 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
RTF1Q92541 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC26.13■■□□□ 1.77
RTF1Q92541 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC26.13■■□□□ 1.77
RTF1Q92541 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RTF1Q92541 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RTF1Q92541 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
RTF1Q92541 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTF1Q92541 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC26.12■■□□□ 1.77
RTF1Q92541 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC26.12■■□□□ 1.77
RTF1Q92541 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTF1Q92541 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTF1Q92541 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTF1Q92541 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RTF1Q92541 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTF1Q92541 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC26.12■■□□□ 1.77
RTF1Q92541 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC26.12■■□□□ 1.77
RTF1Q92541 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.12■■□□□ 1.77
RTF1Q92541 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.12■■□□□ 1.77
RTF1Q92541 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RTF1Q92541 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.12■■□□□ 1.77
RTF1Q92541 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.12■■□□□ 1.77
RTF1Q92541 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
RTF1Q92541 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms