Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCLL1Q8TB92 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 SMG8-203ENST00000578922 2178 ntBASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 AC069152.1-201ENST00000438030 544 ntBASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 AC133041.1-202ENST00000642053 222 ntBASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
HMGCLL1Q8TB92 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 MYC-209ENST00000641252 345 ntBASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HMGCLL1Q8TB92 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.64■□□□□ 0.74
HMGCLL1Q8TB92 AC116562.4-201ENST00000641316 2276 ntBASIC19.64■□□□□ 0.74
HMGCLL1Q8TB92 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HMGCLL1Q8TB92 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 AC091874.3-201ENST00000512672 1195 ntBASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.64■□□□□ 0.73
HMGCLL1Q8TB92 AL158211.5-201ENST00000623583 2518 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms