Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH19Q8TAB3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 MIPEPP3-201ENST00000412105 444 ntBASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 AL031963.3-201ENST00000606441 850 ntBASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH19Q8TAB3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 AL138781.1-201ENST00000566567 1274 ntBASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH19Q8TAB3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 AC125437.2-201ENST00000625180 2167 ntBASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 KRT8P20-201ENST00000423953 1409 ntBASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PCDH19Q8TAB3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH19Q8TAB3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH19Q8TAB3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PCDH19Q8TAB3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH19Q8TAB3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH19Q8TAB3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH19Q8TAB3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.63■□□□□ 0.89
PCDH19Q8TAB3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms