Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUP43Q8NFH3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NUP43Q8NFH3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NUP43Q8NFH3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.75■□□□□ 0.59
NUP43Q8NFH3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUP43Q8NFH3 KRT8P17-201ENST00000453110 1448 ntBASIC18.74■□□□□ 0.59
NUP43Q8NFH3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 C2orf69P4-201ENST00000565394 541 ntBASIC18.74■□□□□ 0.59
NUP43Q8NFH3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 AL691432.2-201ENST00000607222 2038 ntBASIC18.74■□□□□ 0.59
NUP43Q8NFH3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.74■□□□□ 0.59
NUP43Q8NFH3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUP43Q8NFH3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 AC006970.2-201ENST00000450065 779 ntBASIC18.72■□□□□ 0.59
NUP43Q8NFH3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.72■□□□□ 0.59
NUP43Q8NFH3 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 BX276092.2-201ENST00000417668 665 ntBASIC18.71■□□□□ 0.59
NUP43Q8NFH3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 AL031963.3-201ENST00000606441 850 ntBASIC18.71■□□□□ 0.59
NUP43Q8NFH3 AL121832.2-201ENST00000610979 668 ntBASIC18.71■□□□□ 0.59
NUP43Q8NFH3 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 KRT8P20-201ENST00000423953 1409 ntBASIC18.71■□□□□ 0.59
NUP43Q8NFH3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUP43Q8NFH3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.71■□□□□ 0.58
NUP43Q8NFH3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUP43Q8NFH3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms