Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC197Q8NCU1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC197Q8NCU1 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC197Q8NCU1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 KRT125P-201ENST00000546827 989 ntBASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 SMUG1P1-201ENST00000590640 811 ntBASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 AP004607.4-201ENST00000530158 1459 ntBASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC197Q8NCU1 AL390961.4-201ENST00000623958 2535 ntBASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 CROCCP3-202ENST00000420820 1947 ntBASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 ABHD17AP5-201ENST00000580133 923 ntBASIC19.83■□□□□ 0.77
CCDC197Q8NCU1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms