Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LSMEM1Q8N8F7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 AL691432.2-201ENST00000607222 2038 ntBASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
LSMEM1Q8N8F7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 AC010980.2-201ENST00000587099 1412 ntBASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LSMEM1Q8N8F7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 AC092437.1-201ENST00000624794 1048 ntBASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.31■□□□□ 0.52
LSMEM1Q8N8F7 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 KRT8P17-201ENST00000453110 1448 ntBASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 TMEM179-206ENST00000616017 1645 ntBASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LSMEM1Q8N8F7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 AC133552.2-202ENST00000575694 574 ntBASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 AC005181.1-201ENST00000604782 1256 ntBASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 AL589743.5-201ENST00000616611 1050 ntBASIC18.29■□□□□ 0.52
LSMEM1Q8N8F7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms