Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 HLA-G-202ENST00000376815 851 ntBASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 HLA-G-203ENST00000376818 1127 ntBASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 AC092118.2-201ENST00000613495 667 ntBASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ZC3H3Q8IXZ2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 AC006970.2-201ENST00000450065 779 ntBASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.78■■□□□ 1.08
ZC3H3Q8IXZ2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 TSPY6P-201ENST00000448518 926 ntBASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZC3H3Q8IXZ2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.77■■□□□ 1.07
ZC3H3Q8IXZ2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.77■■□□□ 1.07
ZC3H3Q8IXZ2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.77■■□□□ 1.07
ZC3H3Q8IXZ2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 AC073210.2-201ENST00000430369 194 ntBASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 AP001271.2-201ENST00000624018 1556 ntBASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.76■■□□□ 1.07
ZC3H3Q8IXZ2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 AL158211.5-201ENST00000623583 2518 ntBASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZC3H3Q8IXZ2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZC3H3Q8IXZ2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms