Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 AC005181.1-201ENST00000604782 1256 ntBASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 AL589743.5-201ENST00000616611 1050 ntBASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKL3Q8IVW4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.58■□□□□ 0.88
CDKL3Q8IVW4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKL3Q8IVW4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.58■□□□□ 0.88
CDKL3Q8IVW4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKL3Q8IVW4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 KRT8P17-201ENST00000453110 1448 ntBASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 AC010980.2-201ENST00000587099 1412 ntBASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKL3Q8IVW4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 AL031963.3-201ENST00000606441 850 ntBASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.56■□□□□ 0.88
CDKL3Q8IVW4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 AC004911.1-201ENST00000416316 871 ntBASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 AL512625.2-201ENST00000417533 625 ntBASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKL3Q8IVW4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 KRT8P20-201ENST00000423953 1409 ntBASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 AC093787.1-201ENST00000450396 207 ntBASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 AC080038.1-201ENST00000611274 1154 ntBASIC20.54■□□□□ 0.88
CDKL3Q8IVW4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms