Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.95■□□□□ 0.94
ALYREFQ86V81 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ALYREFQ86V81 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.95■□□□□ 0.94
ALYREFQ86V81 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ALYREFQ86V81 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 AC124016.1-201ENST00000609552 612 ntBASIC20.94■□□□□ 0.94
ALYREFQ86V81 AC091076.1-201ENST00000610741 619 ntBASIC20.94■□□□□ 0.94
ALYREFQ86V81 AC026471.5-201ENST00000615068 467 ntBASIC20.94■□□□□ 0.94
ALYREFQ86V81 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ALYREFQ86V81 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
ALYREFQ86V81 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.93■□□□□ 0.94
ALYREFQ86V81 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.93■□□□□ 0.94
ALYREFQ86V81 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.93■□□□□ 0.94
ALYREFQ86V81 AP003071.4-201ENST00000562276 1284 ntBASIC20.93■□□□□ 0.94
ALYREFQ86V81 WWOX-216ENST00000569818 525 ntBASIC20.93■□□□□ 0.94
ALYREFQ86V81 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ALYREFQ86V81 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.93■□□□□ 0.94
ALYREFQ86V81 AL358472.4-201ENST00000633140 710 ntBASIC20.93■□□□□ 0.94
ALYREFQ86V81 AL023875.1-201ENST00000640777 796 ntBASIC20.93■□□□□ 0.94
ALYREFQ86V81 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.93■□□□□ 0.94
ALYREFQ86V81 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ALYREFQ86V81 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALYREFQ86V81 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALYREFQ86V81 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALYREFQ86V81 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALYREFQ86V81 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALYREFQ86V81 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ALYREFQ86V81 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.92■□□□□ 0.94
ALYREFQ86V81 AL450487.1-201ENST00000426799 995 ntBASIC20.92■□□□□ 0.94
ALYREFQ86V81 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.92■□□□□ 0.94
ALYREFQ86V81 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.92■□□□□ 0.94
ALYREFQ86V81 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.92■□□□□ 0.94
ALYREFQ86V81 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.92■□□□□ 0.94
ALYREFQ86V81 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
ALYREFQ86V81 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ALYREFQ86V81 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALYREFQ86V81 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ALYREFQ86V81 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALYREFQ86V81 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALYREFQ86V81 FEM1AP1-201ENST00000431297 1995 ntBASIC20.92■□□□□ 0.94
ALYREFQ86V81 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.92■□□□□ 0.94
ALYREFQ86V81 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ALYREFQ86V81 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.91■□□□□ 0.94
ALYREFQ86V81 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 AL355472.2-201ENST00000422958 438 ntBASIC20.91■□□□□ 0.94
ALYREFQ86V81 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.91■□□□□ 0.94
ALYREFQ86V81 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.91■□□□□ 0.94
ALYREFQ86V81 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.91■□□□□ 0.94
ALYREFQ86V81 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 AC006538.3-201ENST00000612495 578 ntBASIC20.91■□□□□ 0.94
ALYREFQ86V81 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.91■□□□□ 0.94
ALYREFQ86V81 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ALYREFQ86V81 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ALYREFQ86V81 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALYREFQ86V81 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALYREFQ86V81 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALYREFQ86V81 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ALYREFQ86V81 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms