Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPH1Q70E73 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPH1Q70E73 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.07■□□□□ 0.8
RAPH1Q70E73 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAPH1Q70E73 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.06■□□□□ 0.8
RAPH1Q70E73 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RAPH1Q70E73 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 AC097381.1-201ENST00000429019 1296 ntBASIC20.06■□□□□ 0.8
RAPH1Q70E73 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RAPH1Q70E73 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RAPH1Q70E73 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.06■□□□□ 0.8
RAPH1Q70E73 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAPH1Q70E73 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 PGM5P4-201ENST00000421970 445 ntBASIC20.05■□□□□ 0.8
RAPH1Q70E73 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 KRT18P61-201ENST00000585825 1298 ntBASIC20.05■□□□□ 0.8
RAPH1Q70E73 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.05■□□□□ 0.8
RAPH1Q70E73 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RAPH1Q70E73 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAPH1Q70E73 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAPH1Q70E73 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RAPH1Q70E73 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPH1Q70E73 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPH1Q70E73 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPH1Q70E73 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.03■□□□□ 0.8
RAPH1Q70E73 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAPH1Q70E73 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms