Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 AC004854.2-201ENST00000608450 1441 ntBASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
PPP4R4Q6NUP7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PPP4R4Q6NUP7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 KRT87P-202ENST00000534226 1464 ntBASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 AC016769.1-201ENST00000409132 1010 ntBASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.12■□□□□ 0.65
PPP4R4Q6NUP7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 AC092720.2-201ENST00000602388 1665 ntBASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 AC137761.2-201ENST00000561729 223 ntBASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 AC145350.3-201ENST00000569033 163 ntBASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 AC005332.7-201ENST00000614046 2005 ntBASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PPP4R4Q6NUP7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 AC011484.1-201ENST00000377652 1995 ntBASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PPP4R4Q6NUP7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms