Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HMBOX1Q6NT76 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
HMBOX1Q6NT76 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 AC123595.1-201ENST00000440769 1046 ntBASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 LINC02228-203ENST00000641970 1355 ntBASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMBOX1Q6NT76 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMBOX1Q6NT76 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 EEF1DP3-203ENST00000566025 782 ntBASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 AC022517.1-201ENST00000592429 346 ntBASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
HMBOX1Q6NT76 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 BX119927.1-201ENST00000636596 1552 ntBASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 TPRG1LP1-201ENST00000598702 760 ntBASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMBOX1Q6NT76 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMBOX1Q6NT76 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms