Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TTC39BQ5VTQ0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 AC092368.3-202ENST00000574180 1591 ntBASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.84■□□□□ 0.93
TTC39BQ5VTQ0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 UNC93B5-201ENST00000530315 699 ntBASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 PNMA6B-201ENST00000538162 1200 ntBASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TTC39BQ5VTQ0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TTC39BQ5VTQ0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TTC39BQ5VTQ0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TTC39BQ5VTQ0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TTC39BQ5VTQ0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TTC39BQ5VTQ0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TTC39BQ5VTQ0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 FP700111.2-201ENST00000619190 1892 ntBASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TTC39BQ5VTQ0 AL391422.3-201ENST00000603791 2761 ntBASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.8■□□□□ 0.92
TTC39BQ5VTQ0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms