Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 AC079598.2-202ENST00000546624 1451 ntBASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 AC005229.4-201ENST00000610085 2198 ntBASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC18Q5T9S5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC31.14■■■□□ 2.57
CCDC18Q5T9S5 AC026271.3-201ENST00000571884 352 ntBASIC31.14■■■□□ 2.57
CCDC18Q5T9S5 AC145285.6-201ENST00000604632 637 ntBASIC31.14■■■□□ 2.57
CCDC18Q5T9S5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC31.14■■■□□ 2.57
CCDC18Q5T9S5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 AC116562.2-201ENST00000507042 360 ntBASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC18Q5T9S5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 MMP23A-201ENST00000234610 1017 ntBASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 AP000525.1-201ENST00000608286 694 ntBASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC18Q5T9S5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 KRT8P9-201ENST00000558927 1449 ntBASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 UNC93B2-201ENST00000285383 730 ntBASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 MIR6786-201ENST00000616843 113 ntBASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC18Q5T9S5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 YBX1P10-201ENST00000444752 975 ntBASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 AC116351.2-201ENST00000606540 1585 ntBASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CCDC18Q5T9S5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 TK2-213ENST00000563369 882 ntTSL 5 BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 RN7SL850P-201ENST00000579959 291 ntBASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC18Q5T9S5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC31.08■■■□□ 2.57
CCDC18Q5T9S5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
CCDC18Q5T9S5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC18Q5T9S5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms