Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 AC099778.1-201ENST00000568593 1911 ntBASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 HLA-L-209ENST00000420110 1011 ntBASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 AL109923.1-201ENST00000618799 583 ntBASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCGF3Q3KNV8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 SLC29A4P1-201ENST00000398760 971 ntBASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 CYP2T1P-201ENST00000432607 1285 ntBASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 CDV3P1-201ENST00000471403 739 ntBASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 AC083906.2-201ENST00000511578 360 ntBASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 AF201337.1-201ENST00000520239 748 ntBASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 FP700111.2-201ENST00000619190 1892 ntBASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.67■□□□□ 0.42
PCGF3Q3KNV8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 AL050303.2-201ENST00000619798 666 ntBASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCGF3Q3KNV8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 AC018445.3-201ENST00000624177 1945 ntBASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 AC104771.1-201ENST00000603335 964 ntBASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.65■□□□□ 0.42
PCGF3Q3KNV8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms