Protein–RNA interactions for Protein: Q3E7B6

VMA9, V-type proton ATPase subunit e, yeastyeast

Predictions only

Length 73 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA9Q3E7B6 IRC16YPR038W 360 nt-2.47□□□□□ -2.8
VMA9Q3E7B6 snR5snR5 204 nt-2.48□□□□□ -2.81
VMA9Q3E7B6 LIN1YHR156C 1023 nt-2.49□□□□□ -2.81
VMA9Q3E7B6 YNL067W-AYNL067W-A 147 nt-2.5□□□□□ -2.81
VMA9Q3E7B6 YNR077CYNR077C 255 nt-2.52□□□□□ -2.81
VMA9Q3E7B6 YOR161W-AYOR161W-A 81 nt-2.52□□□□□ -2.81
VMA9Q3E7B6 YIL002W-AYIL002W-A 210 nt-2.54□□□□□ -2.82
VMA9Q3E7B6 TAH1YCR060W 336 nt-2.55□□□□□ -2.82
VMA9Q3E7B6 YBL062WYBL062W 381 nt-2.55□□□□□ -2.82
VMA9Q3E7B6 YOL106WYOL106W 354 nt-2.55□□□□□ -2.82
VMA9Q3E7B6 YOR364WYOR364W 369 nt-2.55□□□□□ -2.82
VMA9Q3E7B6 APQ12YIL040W 417 nt-2.56□□□□□ -2.82
VMA9Q3E7B6 tY(GUA)QtY(GUA)Q 84 nt-2.56□□□□□ -2.82
VMA9Q3E7B6 snR49snR49 165 nt-2.56□□□□□ -2.82
VMA9Q3E7B6 YCR100CYCR100C 951 nt-2.57□□□□□ -2.82
VMA9Q3E7B6 POL32YJR043C 1053 nt-2.58□□□□□ -2.82
VMA9Q3E7B6 snR59snR59 78 nt-2.59□□□□□ -2.82
VMA9Q3E7B6 YLR154W-FYLR154W-F 141 nt-2.59□□□□□ -2.82
VMA9Q3E7B6 SGF11YPL047W 300 nt-2.59□□□□□ -2.82
VMA9Q3E7B6 YKL202WYKL202W 582 nt-2.6□□□□□ -2.83
VMA9Q3E7B6 YGL015CYGL015C 393 nt-2.61□□□□□ -2.83
VMA9Q3E7B6 YBL107W-AYBL107W-A 105 nt-2.61□□□□□ -2.83
VMA9Q3E7B6 YOR011W-AYOR011W-A 207 nt-2.62□□□□□ -2.83
VMA9Q3E7B6 RRI2YOL117W 1938 nt-2.62□□□□□ -2.83
VMA9Q3E7B6 MND1YGL183C 660 nt-2.63□□□□□ -2.83
VMA9Q3E7B6 YER188C-AYER188C-A 300 nt-2.64□□□□□ -2.83
VMA9Q3E7B6 YLR264C-AYLR264C-A 117 nt-2.64□□□□□ -2.83
VMA9Q3E7B6 RUF20RUF20 443 nt-2.64□□□□□ -2.83
VMA9Q3E7B6 YJL020W-AYJL020W-A 258 nt-2.65□□□□□ -2.83
VMA9Q3E7B6 YGL239CYGL239C 315 nt-2.69□□□□□ -2.84
VMA9Q3E7B6 YNL171CYNL171C 369 nt-2.7□□□□□ -2.84
VMA9Q3E7B6 SCEIQ0160 708 nt-2.73□□□□□ -2.85
VMA9Q3E7B6 CUP1-1YHR053C 186 nt-2.73□□□□□ -2.85
VMA9Q3E7B6 CUP1-2YHR055C 186 nt-2.73□□□□□ -2.85
VMA9Q3E7B6 YNL058CYNL058C 951 nt-2.73□□□□□ -2.85
VMA9Q3E7B6 snR51snR51 107 nt-2.73□□□□□ -2.85
VMA9Q3E7B6 YOR170WYOR170W 306 nt-2.74□□□□□ -2.85
VMA9Q3E7B6 YMR304C-AYMR304C-A 351 nt-2.75□□□□□ -2.85
VMA9Q3E7B6 YOR192C-CYOR192C-C 237 nt-2.75□□□□□ -2.85
VMA9Q3E7B6 ACF4YJR083C 930 nt-2.76□□□□□ -2.85
VMA9Q3E7B6 POP7YBR167C 423 nt-2.76□□□□□ -2.85
VMA9Q3E7B6 YDR220CYDR220C 294 nt-2.78□□□□□ -2.85
VMA9Q3E7B6 YPT6YLR262C 648 nt-2.78□□□□□ -2.85
VMA9Q3E7B6 YOR366WYOR366W 354 nt-2.78□□□□□ -2.85
VMA9Q3E7B6 YDR366CYDR366C 399 nt-2.8□□□□□ -2.86
VMA9Q3E7B6 RPL22BYFL034C-A 369 nt-2.81□□□□□ -2.86
VMA9Q3E7B6 ILM1YJR118C 612 nt-2.83□□□□□ -2.86
VMA9Q3E7B6 SKI7YOR076C 2244 nt-2.84□□□□□ -2.86
VMA9Q3E7B6 POP6YGR030C 477 nt-2.86□□□□□ -2.87
VMA9Q3E7B6 ZEO1YOL109W 342 nt-2.86□□□□□ -2.87
VMA9Q3E7B6 YER135CYER135C 393 nt-2.88□□□□□ -2.87
VMA9Q3E7B6 YNL146C-AYNL146C-A 195 nt-2.88□□□□□ -2.87
VMA9Q3E7B6 FYV7YLR068W 456 nt-2.89□□□□□ -2.87
VMA9Q3E7B6 snR189snR189 189 nt-2.9□□□□□ -2.87
VMA9Q3E7B6 HMLALPHA2YCL067C 633 nt-2.91□□□□□ -2.88
VMA9Q3E7B6 MATALPHA2YCR039C 633 nt-2.91□□□□□ -2.88
VMA9Q3E7B6 HMRA2YCR096C 360 nt-2.91□□□□□ -2.88
VMA9Q3E7B6 YPR010C-AYPR010C-A 219 nt-2.91□□□□□ -2.88
VMA9Q3E7B6 YPR016W-AYPR016W-A 261 nt-2.91□□□□□ -2.88
VMA9Q3E7B6 YMR013C-AYMR013C-A 150 nt-2.94□□□□□ -2.88
VMA9Q3E7B6 SDH6YDR379C-A 240 nt-2.95□□□□□ -2.88
VMA9Q3E7B6 YGL230CYGL230C 444 nt-2.96□□□□□ -2.88
VMA9Q3E7B6 snR74snR74 88 nt-2.97□□□□□ -2.88
VMA9Q3E7B6 YCR001WYCR001W 315 nt-2.98□□□□□ -2.89
VMA9Q3E7B6 PMP2YEL017C-A 132 nt-2.98□□□□□ -2.89
VMA9Q3E7B6 IRC13YOR235W 315 nt-2.98□□□□□ -2.89
VMA9Q3E7B6 YER053C-AYER053C-A 114 nt-2.99□□□□□ -2.89
VMA9Q3E7B6 YPL068CYPL068C 882 nt-2.99□□□□□ -2.89
VMA9Q3E7B6 SRB7YDR308C 423 nt-3□□□□□ -2.89
VMA9Q3E7B6 YFL063WYFL063W 456 nt-3□□□□□ -2.89
VMA9Q3E7B6 YGL052WYGL052W 306 nt-3□□□□□ -2.89
VMA9Q3E7B6 YHR050W-AYHR050W-A 171 nt-3□□□□□ -2.89
VMA9Q3E7B6 BUD26YDR241W 288 nt-3.04□□□□□ -2.9
VMA9Q3E7B6 RPS30AYLR287C-A 192 nt-3.04□□□□□ -2.9
VMA9Q3E7B6 YPR039WYPR039W 336 nt-3.07□□□□□ -2.9
VMA9Q3E7B6 YHR125WYHR125W 306 nt-3.08□□□□□ -2.9
VMA9Q3E7B6 AI5_BETAQ0075 1065 nt-3.09□□□□□ -2.9
VMA9Q3E7B6 YKL100W-AYKL100W-A 90 nt-3.09□□□□□ -2.9
VMA9Q3E7B6 AIM29YKR074W 468 nt-3.1□□□□□ -2.91
VMA9Q3E7B6 YNL303WYNL303W 348 nt-3.1□□□□□ -2.91
VMA9Q3E7B6 YJR087WYJR087W 351 nt-3.11□□□□□ -2.91
VMA9Q3E7B6 YGR025WYGR025W 303 nt-3.12□□□□□ -2.91
VMA9Q3E7B6 YDR354C-AYDR354C-A 144 nt-3.13□□□□□ -2.91
VMA9Q3E7B6 JLP2YMR132C 627 nt-3.13□□□□□ -2.91
VMA9Q3E7B6 snR57snR57 88 nt-3.14□□□□□ -2.91
VMA9Q3E7B6 YAR029WYAR029W 225 nt-3.14□□□□□ -2.91
VMA9Q3E7B6 YFR009W-AYFR009W-A 258 nt-3.15□□□□□ -2.91
VMA9Q3E7B6 CBS1YDL069C 690 nt-3.16□□□□□ -2.92
VMA9Q3E7B6 YLR163W-AYLR163W-A 114 nt-3.17□□□□□ -2.92
VMA9Q3E7B6 YLR334CYLR334C 381 nt-3.17□□□□□ -2.92
VMA9Q3E7B6 MRPL32YCR003W 552 nt-3.19□□□□□ -2.92
VMA9Q3E7B6 CDC65tQ(CUG)M 72 nt-3.2□□□□□ -2.92
VMA9Q3E7B6 YBR126W-BYBR126W-B 144 nt-3.2□□□□□ -2.92
VMA9Q3E7B6 YKL083WYKL083W 615 nt-3.21□□□□□ -2.92
VMA9Q3E7B6 YHR007C-AYHR007C-A 216 nt-3.26□□□□□ -2.93
VMA9Q3E7B6 YLR456WYLR456W 615 nt-3.26□□□□□ -2.93
VMA9Q3E7B6 HUR1YGL168W 333 nt-3.27□□□□□ -2.93
VMA9Q3E7B6 YPL229WYPL229W 621 nt-3.27□□□□□ -2.93
VMA9Q3E7B6 YPR002C-AYPR002C-A 198 nt-3.27□□□□□ -2.93
VMA9Q3E7B6 YEL020C-BYEL020C-B 198 nt-3.28□□□□□ -2.93
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms