Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.37■□□□□ 0.37
RSPO1Q2MKA7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RSPO1Q2MKA7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RSPO1Q2MKA7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 AC092118.2-201ENST00000613495 667 ntBASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.34■□□□□ 0.37
RSPO1Q2MKA7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO1Q2MKA7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.33■□□□□ 0.37
RSPO1Q2MKA7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.33■□□□□ 0.37
RSPO1Q2MKA7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.33■□□□□ 0.37
RSPO1Q2MKA7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO1Q2MKA7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RSPO1Q2MKA7 KRT16P6-202ENST00000425692 1426 ntBASIC17.33■□□□□ 0.36
RSPO1Q2MKA7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
RSPO1Q2MKA7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RSPO1Q2MKA7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.33■□□□□ 0.36
RSPO1Q2MKA7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms