Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 YOR302WYOR302W 78 nt1.35□□□□□ -2.19
PDH1Q12428 SWI4YER111C 3282 nt1.35□□□□□ -2.19
PDH1Q12428 SEC3YER008C 4011 nt1.35□□□□□ -2.19
PDH1Q12428 MMS4YBR098W 2076 nt1.35□□□□□ -2.19
PDH1Q12428 TRM732YMR259C 4263 nt1.35□□□□□ -2.19
PDH1Q12428 MDS3YGL197W 4464 nt1.34□□□□□ -2.19
PDH1Q12428 APQ12YIL040W 417 nt1.34□□□□□ -2.19
PDH1Q12428 YOR072W-BYOR072W-B 162 nt1.34□□□□□ -2.19
PDH1Q12428 snR14snR14 160 nt1.34□□□□□ -2.19
PDH1Q12428 tQ(UUG)E2tQ(UUG)E2 72 nt1.33□□□□□ -2.2
PDH1Q12428 YKU70YMR284W 1809 nt1.33□□□□□ -2.2
PDH1Q12428 AHC1YOR023C 1701 nt1.32□□□□□ -2.2
PDH1Q12428 YIR030W-AYIR030W-A 384 nt1.32□□□□□ -2.2
PDH1Q12428 FYV8YGR196C 2454 nt1.32□□□□□ -2.2
PDH1Q12428 PET127YOR017W 2403 nt1.31□□□□□ -2.2
PDH1Q12428 NUP188YML103C 4968 nt1.31□□□□□ -2.2
PDH1Q12428 FIG4YNL325C 2640 nt1.31□□□□□ -2.2
PDH1Q12428 CDC25YLR310C 4770 nt1.3□□□□□ -2.2
PDH1Q12428 PAU12YGR294W 363 nt1.3□□□□□ -2.2
PDH1Q12428 ECM12YHR021W-A 456 nt1.3□□□□□ -2.2
PDH1Q12428 tV(UAC)BtV(UAC)B 74 nt1.3□□□□□ -2.2
PDH1Q12428 tV(UAC)DtV(UAC)D 74 nt1.3□□□□□ -2.2
PDH1Q12428 PAU24YBR301W 363 nt1.3□□□□□ -2.2
PDH1Q12428 PAN2YGL094C 3348 nt1.3□□□□□ -2.2
PDH1Q12428 SLD3YGL113W 2007 nt1.3□□□□□ -2.2
PDH1Q12428 ISD11YER048W-A 285 nt1.29□□□□□ -2.2
PDH1Q12428 YLL020CYLL020C 306 nt1.29□□□□□ -2.2
PDH1Q12428 YAR009CYAR009C 3591 nt1.29□□□□□ -2.2
PDH1Q12428 NUP145YGL092W 3954 nt1.29□□□□□ -2.2
PDH1Q12428 OLI1Q0130 231 nt1.28□□□□□ -2.2
PDH1Q12428 YLL019W-AYLL019W-A 93 nt1.28□□□□□ -2.2
PDH1Q12428 PAM16YJL104W 450 nt1.27□□□□□ -2.21
PDH1Q12428 RAD9YDR217C 3930 nt1.26□□□□□ -2.21
PDH1Q12428 YDL196WYDL196W 330 nt1.26□□□□□ -2.21
PDH1Q12428 YNL337WYNL337W 255 nt1.26□□□□□ -2.21
PDH1Q12428 APL3YBL037W 3078 nt1.26□□□□□ -2.21
PDH1Q12428 SET3YKR029C 2256 nt1.26□□□□□ -2.21
PDH1Q12428 RPS30BYOR182C 192 nt1.25□□□□□ -2.21
PDH1Q12428 YBR221W-AYBR221W-A 105 nt1.25□□□□□ -2.21
PDH1Q12428 SIP4YJL089W 2490 nt1.25□□□□□ -2.21
PDH1Q12428 STO1YMR125W 2586 nt1.24□□□□□ -2.21
PDH1Q12428 YCR018C-AYCR018C-A 255 nt1.24□□□□□ -2.21
PDH1Q12428 YDR354C-AYDR354C-A 144 nt1.24□□□□□ -2.21
PDH1Q12428 ULI1YFR026C 510 nt1.24□□□□□ -2.21
PDH1Q12428 YNL097C-BYNL097C-B 123 nt1.24□□□□□ -2.21
PDH1Q12428 ROM2YLR371W 4071 nt1.24□□□□□ -2.21
PDH1Q12428 SMC1YFL008W 3678 nt1.24□□□□□ -2.21
PDH1Q12428 YEL014CYEL014C 306 nt1.23□□□□□ -2.21
PDH1Q12428 YJL026C-AYJL026C-A 222 nt1.23□□□□□ -2.21
PDH1Q12428 EAF1YDR359C 2949 nt1.22□□□□□ -2.21
PDH1Q12428 YDL185C-AYDL185C-A 228 nt1.22□□□□□ -2.21
PDH1Q12428 YIL020C-AYIL020C-A 339 nt1.22□□□□□ -2.21
PDH1Q12428 YBR131C-AYBR131C-A 90 nt1.22□□□□□ -2.21
PDH1Q12428 NST1YNL091W 3723 nt1.21□□□□□ -2.22
PDH1Q12428 YOR345CYOR345C 351 nt1.21□□□□□ -2.22
PDH1Q12428 WAR1YML076C 2835 nt1.21□□□□□ -2.22
PDH1Q12428 STB6YKL072W 2301 nt1.2□□□□□ -2.22
PDH1Q12428 APL1YJR005W 2103 nt1.2□□□□□ -2.22
PDH1Q12428 YAL067W-AYAL067W-A 228 nt1.18□□□□□ -2.22
PDH1Q12428 YNL211CYNL211C 261 nt1.18□□□□□ -2.22
PDH1Q12428 YBR200W-AYBR200W-A 165 nt1.18□□□□□ -2.22
PDH1Q12428 PAA1YDR071C 576 nt1.17□□□□□ -2.22
PDH1Q12428 RPL33BYOR234C 324 nt1.17□□□□□ -2.22
PDH1Q12428 YNL284C-BYNL284C-B 5268 nt1.16□□□□□ -2.22
PDH1Q12428 QCR9YGR183C 201 nt1.15□□□□□ -2.23
PDH1Q12428 NUP157YER105C 4176 nt1.15□□□□□ -2.23
PDH1Q12428 CMC4YMR194C-B 222 nt1.14□□□□□ -2.23
PDH1Q12428 snR46snR46 197 nt1.14□□□□□ -2.23
PDH1Q12428 GEA2YEL022W 4380 nt1.14□□□□□ -2.23
PDH1Q12428 CDC39YCR093W 6327 nt1.13□□□□□ -2.23
PDH1Q12428 NOP9YJL010C 2001 nt1.13□□□□□ -2.23
PDH1Q12428 YJL182CYJL182C 318 nt1.12□□□□□ -2.23
PDH1Q12428 YNL198CYNL198C 303 nt1.12□□□□□ -2.23
PDH1Q12428 YPL044CYPL044C 549 nt1.12□□□□□ -2.23
PDH1Q12428 HAL9YOL089C 3093 nt1.12□□□□□ -2.23
PDH1Q12428 UBP3YER151C 2739 nt1.12□□□□□ -2.23
PDH1Q12428 Q0032Q0032 291 nt1.11□□□□□ -2.23
PDH1Q12428 YIL134C-AYIL134C-A 204 nt1.11□□□□□ -2.23
PDH1Q12428 YJL150WYJL150W 303 nt1.11□□□□□ -2.23
PDH1Q12428 COX12YLR038C 252 nt1.1□□□□□ -2.23
PDH1Q12428 COY1YKL179C 2040 nt1.1□□□□□ -2.23
PDH1Q12428 SPT7YBR081C 3999 nt1.09□□□□□ -2.23
PDH1Q12428 tF(GAA)BtF(GAA)B 73 nt1.09□□□□□ -2.23
PDH1Q12428 tF(GAA)FtF(GAA)F 73 nt1.09□□□□□ -2.23
PDH1Q12428 tF(GAA)GtF(GAA)G 73 nt1.09□□□□□ -2.23
PDH1Q12428 tF(GAA)H1tF(GAA)H1 73 nt1.09□□□□□ -2.23
PDH1Q12428 tF(GAA)H2tF(GAA)H2 73 nt1.09□□□□□ -2.23
PDH1Q12428 tF(GAA)MtF(GAA)M 73 nt1.09□□□□□ -2.23
PDH1Q12428 tF(GAA)P1tF(GAA)P1 73 nt1.09□□□□□ -2.23
PDH1Q12428 tF(GAA)P2tF(GAA)P2 73 nt1.09□□□□□ -2.23
PDH1Q12428 YGL007C-AYGL007C-A 87 nt1.09□□□□□ -2.23
PDH1Q12428 YGR151CYGR151C 336 nt1.09□□□□□ -2.23
PDH1Q12428 YLR466C-BYLR466C-B 117 nt1.09□□□□□ -2.23
PDH1Q12428 YOR225WYOR225W 330 nt1.09□□□□□ -2.23
PDH1Q12428 RPL26BYGR034W 384 nt1.08□□□□□ -2.24
PDH1Q12428 snR52snR52 92 nt1.08□□□□□ -2.24
PDH1Q12428 YGL123C-AYGL123C-A 231 nt1.07□□□□□ -2.24
PDH1Q12428 KAP120YPL125W 3099 nt1.06□□□□□ -2.24
PDH1Q12428 YCR038W-AYCR038W-A 126 nt1.06□□□□□ -2.24
PDH1Q12428 YFR012W-AYFR012W-A 87 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 24.2 ms