Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 SDH7YDR511W 402 nt-2.68□□□□□ -2.84
RKR1Q04781 RPS20YHL015W 366 nt-2.7□□□□□ -2.84
RKR1Q04781 snR49snR49 165 nt-2.7□□□□□ -2.84
RKR1Q04781 AGA2YGL032C 264 nt-2.7□□□□□ -2.84
RKR1Q04781 YIR044CYIR044C 186 nt-2.7□□□□□ -2.84
RKR1Q04781 YHR130CYHR130C 336 nt-2.73□□□□□ -2.85
RKR1Q04781 snR189snR189 189 nt-2.77□□□□□ -2.85
RKR1Q04781 YDR269CYDR269C 324 nt-2.78□□□□□ -2.85
RKR1Q04781 LOC1YFR001W 615 nt-2.78□□□□□ -2.86
RKR1Q04781 YPL261CYPL261C 309 nt-2.78□□□□□ -2.86
RKR1Q04781 YGR228WYGR228W 345 nt-2.79□□□□□ -2.86
RKR1Q04781 YOR293C-AYOR293C-A 150 nt-2.79□□□□□ -2.86
RKR1Q04781 YCR018C-AYCR018C-A 255 nt-2.8□□□□□ -2.86
RKR1Q04781 RSM18YER050C 417 nt-2.8□□□□□ -2.86
RKR1Q04781 YJL086CYJL086C 369 nt-2.8□□□□□ -2.86
RKR1Q04781 BER1YLR412W 825 nt-2.82□□□□□ -2.86
RKR1Q04781 RUF20RUF20 443 nt-2.84□□□□□ -2.86
RKR1Q04781 ACF4YJR083C 930 nt-2.88□□□□□ -2.87
RKR1Q04781 SPC24YMR117C 642 nt-2.88□□□□□ -2.87
RKR1Q04781 YOR366WYOR366W 354 nt-2.89□□□□□ -2.87
RKR1Q04781 YBR072C-AYBR072C-A 162 nt-2.89□□□□□ -2.87
RKR1Q04781 YPR092WYPR092W 306 nt-2.89□□□□□ -2.87
RKR1Q04781 snR5snR5 204 nt-2.9□□□□□ -2.87
RKR1Q04781 YDR290WYDR290W 330 nt-2.9□□□□□ -2.87
RKR1Q04781 CBS1YDL069C 690 nt-2.91□□□□□ -2.87
RKR1Q04781 YJR140W-AYJR140W-A 150 nt-2.91□□□□□ -2.88
RKR1Q04781 YER135CYER135C 393 nt-2.92□□□□□ -2.88
RKR1Q04781 SCEIQ0160 708 nt-2.93□□□□□ -2.88
RKR1Q04781 tT(UGU)Q1tT(UGU)Q1 76 nt-2.93□□□□□ -2.88
RKR1Q04781 COX7YMR256C 183 nt-2.95□□□□□ -2.88
RKR1Q04781 YNL162W-AYNL162W-A 219 nt-2.95□□□□□ -2.88
RKR1Q04781 snR24snR24 89 nt-2.95□□□□□ -2.88
RKR1Q04781 CUP1-1YHR053C 186 nt-2.96□□□□□ -2.88
RKR1Q04781 CUP1-2YHR055C 186 nt-2.96□□□□□ -2.88
RKR1Q04781 YOR170WYOR170W 306 nt-2.96□□□□□ -2.88
RKR1Q04781 YLR264C-AYLR264C-A 117 nt-2.97□□□□□ -2.89
RKR1Q04781 YPR016W-AYPR016W-A 261 nt-2.97□□□□□ -2.89
RKR1Q04781 YOR011W-AYOR011W-A 207 nt-3□□□□□ -2.89
RKR1Q04781 PET20YPL159C 762 nt-3□□□□□ -2.89
RKR1Q04781 YGL015CYGL015C 393 nt-3.01□□□□□ -2.89
RKR1Q04781 snR74snR74 88 nt-3.02□□□□□ -2.89
RKR1Q04781 RPL22BYFL034C-A 369 nt-3.04□□□□□ -2.9
RKR1Q04781 YOR192C-CYOR192C-C 237 nt-3.04□□□□□ -2.9
RKR1Q04781 YPR010C-AYPR010C-A 219 nt-3.04□□□□□ -2.9
RKR1Q04781 THG1YGR024C 714 nt-3.05□□□□□ -2.9
RKR1Q04781 BNS1YGR230W 414 nt-3.07□□□□□ -2.9
RKR1Q04781 SRB7YDR308C 423 nt-3.08□□□□□ -2.9
RKR1Q04781 YGL052WYGL052W 306 nt-3.08□□□□□ -2.9
RKR1Q04781 YIR021W-AYIR021W-A 213 nt-3.08□□□□□ -2.9
RKR1Q04781 YBL107W-AYBL107W-A 105 nt-3.08□□□□□ -2.9
RKR1Q04781 DFG10YIL049W 762 nt-3.09□□□□□ -2.9
RKR1Q04781 IRC16YPR038W 360 nt-3.09□□□□□ -2.9
RKR1Q04781 snR81snR81 201 nt-3.11□□□□□ -2.91
RKR1Q04781 YJR162CYJR162C 351 nt-3.12□□□□□ -2.91
RKR1Q04781 YNL337WYNL337W 255 nt-3.12□□□□□ -2.91
RKR1Q04781 SGF11YPL047W 300 nt-3.12□□□□□ -2.91
RKR1Q04781 snR72snR72 98 nt-3.13□□□□□ -2.91
RKR1Q04781 YDR366CYDR366C 399 nt-3.14□□□□□ -2.91
RKR1Q04781 CDC65tQ(CUG)M 72 nt-3.15□□□□□ -2.91
RKR1Q04781 CWC23YGL128C 852 nt-3.16□□□□□ -2.91
RKR1Q04781 YKL202WYKL202W 582 nt-3.16□□□□□ -2.91
RKR1Q04781 VPS63YLR261C 327 nt-3.18□□□□□ -2.92
RKR1Q04781 YOL106WYOL106W 354 nt-3.23□□□□□ -2.93
RKR1Q04781 LSM4YER112W 564 nt-3.24□□□□□ -2.93
RKR1Q04781 MND1YGL183C 660 nt-3.24□□□□□ -2.93
RKR1Q04781 AIM29YKR074W 468 nt-3.25□□□□□ -2.93
RKR1Q04781 YKL044WYKL044W 321 nt-3.27□□□□□ -2.93
RKR1Q04781 snR51snR51 107 nt-3.27□□□□□ -2.93
RKR1Q04781 SDH6YDR379C-A 240 nt-3.29□□□□□ -2.94
RKR1Q04781 YPL229WYPL229W 621 nt-3.29□□□□□ -2.94
RKR1Q04781 POP7YBR167C 423 nt-3.29□□□□□ -2.94
RKR1Q04781 YER188C-AYER188C-A 300 nt-3.29□□□□□ -2.94
RKR1Q04781 YHR125WYHR125W 306 nt-3.29□□□□□ -2.94
RKR1Q04781 YMR304C-AYMR304C-A 351 nt-3.29□□□□□ -2.94
RKR1Q04781 snR59snR59 78 nt-3.32□□□□□ -2.94
RKR1Q04781 YER053C-AYER053C-A 114 nt-3.32□□□□□ -2.94
RKR1Q04781 YNL058CYNL058C 951 nt-3.32□□□□□ -2.94
RKR1Q04781 YIL029CYIL029C 429 nt-3.33□□□□□ -2.94
RKR1Q04781 JLP2YMR132C 627 nt-3.34□□□□□ -2.94
RKR1Q04781 YGL239CYGL239C 315 nt-3.35□□□□□ -2.95
RKR1Q04781 YPT6YLR262C 648 nt-3.35□□□□□ -2.95
RKR1Q04781 YBR285WYBR285W 435 nt-3.35□□□□□ -2.95
RKR1Q04781 snR77snR77 88 nt-3.38□□□□□ -2.95
RKR1Q04781 HMLALPHA2YCL067C 633 nt-3.39□□□□□ -2.95
RKR1Q04781 MATALPHA2YCR039C 633 nt-3.39□□□□□ -2.95
RKR1Q04781 HMRA2YCR096C 360 nt-3.39□□□□□ -2.95
RKR1Q04781 ATP19YOL077W-A 207 nt-3.4□□□□□ -2.95
RKR1Q04781 ZEO1YOL109W 342 nt-3.4□□□□□ -2.95
RKR1Q04781 YGR240C-AYGR240C-A 201 nt-3.41□□□□□ -2.96
RKR1Q04781 FYV7YLR068W 456 nt-3.44□□□□□ -2.96
RKR1Q04781 snR39BsnR39B 96 nt-3.45□□□□□ -2.96
RKR1Q04781 YFR009W-AYFR009W-A 258 nt-3.46□□□□□ -2.96
RKR1Q04781 YGR025WYGR025W 303 nt-3.47□□□□□ -2.97
RKR1Q04781 YOR121CYOR121C 306 nt-3.48□□□□□ -2.97
RKR1Q04781 YKL100W-AYKL100W-A 90 nt-3.52□□□□□ -2.97
RKR1Q04781 YNL205CYNL205C 423 nt-3.52□□□□□ -2.97
RKR1Q04781 ILM1YJR118C 612 nt-3.53□□□□□ -2.97
RKR1Q04781 YOR364WYOR364W 369 nt-3.53□□□□□ -2.97
RKR1Q04781 YAR029WYAR029W 225 nt-3.55□□□□□ -2.98
RKR1Q04781 YMR315W-AYMR315W-A 108 nt-3.55□□□□□ -2.98
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms