Protein–RNA interactions for Protein: Q03654

CEF1, Pre-mRNA-splicing factor CEF1, yeastyeast

Predicted RBP Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CEF1Q03654 SLX4YLR135W 2247 nt1.73□□□□□ -2.13
CEF1Q03654 PIP2YOR363C 2991 nt1.73□□□□□ -2.13
CEF1Q03654 POL5YEL055C 3069 nt1.72□□□□□ -2.13
CEF1Q03654 Q0092Q0092 141 nt1.72□□□□□ -2.13
CEF1Q03654 RPL33BYOR234C 324 nt1.72□□□□□ -2.13
CEF1Q03654 YDR354C-AYDR354C-A 144 nt1.71□□□□□ -2.14
CEF1Q03654 FIG2YCR089W 4830 nt1.71□□□□□ -2.14
CEF1Q03654 FIG4YNL325C 2640 nt1.7□□□□□ -2.14
CEF1Q03654 PMP1YCR024C-A 123 nt1.7□□□□□ -2.14
CEF1Q03654 AIM44YPL158C 2277 nt1.7□□□□□ -2.14
CEF1Q03654 PBY1YBR094W 2262 nt1.7□□□□□ -2.14
CEF1Q03654 COY1YKL179C 2040 nt1.69□□□□□ -2.14
CEF1Q03654 snR14snR14 160 nt1.69□□□□□ -2.14
CEF1Q03654 YLR422WYLR422W 5799 nt1.69□□□□□ -2.14
CEF1Q03654 MSN5YDR335W 3675 nt1.68□□□□□ -2.14
CEF1Q03654 YIL134C-AYIL134C-A 204 nt1.68□□□□□ -2.14
CEF1Q03654 KIP1YBL063W 3336 nt1.68□□□□□ -2.14
CEF1Q03654 ANS1YHR126C 480 nt1.67□□□□□ -2.14
CEF1Q03654 YOR161W-BYOR161W-B 261 nt1.67□□□□□ -2.14
CEF1Q03654 SLD3YGL113W 2007 nt1.67□□□□□ -2.14
CEF1Q03654 YLL054CYLL054C 2532 nt1.67□□□□□ -2.14
CEF1Q03654 AZF1YOR113W 2745 nt1.67□□□□□ -2.14
CEF1Q03654 TRM3YDL112W 4311 nt1.67□□□□□ -2.14
CEF1Q03654 HKR1YDR420W 5409 nt1.66□□□□□ -2.14
CEF1Q03654 SEC21YNL287W 2808 nt1.65□□□□□ -2.14
CEF1Q03654 YJL026C-AYJL026C-A 222 nt1.65□□□□□ -2.15
CEF1Q03654 YDL206WYDL206W 2289 nt1.65□□□□□ -2.15
CEF1Q03654 HAL9YOL089C 3093 nt1.64□□□□□ -2.15
CEF1Q03654 ATP8Q0080 147 nt1.63□□□□□ -2.15
CEF1Q03654 NUP188YML103C 4968 nt1.62□□□□□ -2.15
CEF1Q03654 RPS30BYOR182C 192 nt1.62□□□□□ -2.15
CEF1Q03654 CDC31YOR257W 486 nt1.62□□□□□ -2.15
CEF1Q03654 PET127YOR017W 2403 nt1.61□□□□□ -2.15
CEF1Q03654 FYV8YGR196C 2454 nt1.61□□□□□ -2.15
CEF1Q03654 SWI4YER111C 3282 nt1.61□□□□□ -2.15
CEF1Q03654 YBL053WYBL053W 375 nt1.61□□□□□ -2.15
CEF1Q03654 YOR381W-AYOR381W-A 168 nt1.61□□□□□ -2.15
CEF1Q03654 ALY2YJL084C 3141 nt1.6□□□□□ -2.15
CEF1Q03654 NUP157YER105C 4176 nt1.6□□□□□ -2.15
CEF1Q03654 PAA1YDR071C 576 nt1.6□□□□□ -2.15
CEF1Q03654 YEL073CYEL073C 324 nt1.58□□□□□ -2.16
CEF1Q03654 COX12YLR038C 252 nt1.58□□□□□ -2.16
CEF1Q03654 YCR038W-AYCR038W-A 126 nt1.57□□□□□ -2.16
CEF1Q03654 NUP192YJL039C 5052 nt1.57□□□□□ -2.16
CEF1Q03654 YPL044CYPL044C 549 nt1.56□□□□□ -2.16
CEF1Q03654 APL3YBL037W 3078 nt1.56□□□□□ -2.16
CEF1Q03654 YAR009CYAR009C 3591 nt1.56□□□□□ -2.16
CEF1Q03654 YNL211CYNL211C 261 nt1.55□□□□□ -2.16
CEF1Q03654 YOR170WYOR170W 306 nt1.55□□□□□ -2.16
CEF1Q03654 RSM22YKL155C 1887 nt1.54□□□□□ -2.16
CEF1Q03654 MMS4YBR098W 2076 nt1.54□□□□□ -2.16
CEF1Q03654 YLL020CYLL020C 306 nt1.54□□□□□ -2.16
CEF1Q03654 RAD9YDR217C 3930 nt1.54□□□□□ -2.16
CEF1Q03654 CCH1YGR217W 6120 nt1.53□□□□□ -2.16
CEF1Q03654 PAN2YGL094C 3348 nt1.53□□□□□ -2.16
CEF1Q03654 YNL170WYNL170W 396 nt1.53□□□□□ -2.16
CEF1Q03654 SET3YKR029C 2256 nt1.52□□□□□ -2.17
CEF1Q03654 APL1YJR005W 2103 nt1.52□□□□□ -2.17
CEF1Q03654 YAL067W-AYAL067W-A 228 nt1.52□□□□□ -2.17
CEF1Q03654 TTI1YKL033W 3117 nt1.52□□□□□ -2.17
CEF1Q03654 CDC25YLR310C 4770 nt1.52□□□□□ -2.17
CEF1Q03654 NUP145YGL092W 3954 nt1.51□□□□□ -2.17
CEF1Q03654 CAT8YMR280C 4302 nt1.51□□□□□ -2.17
CEF1Q03654 STO1YMR125W 2586 nt1.51□□□□□ -2.17
CEF1Q03654 CLU1YMR012W 3834 nt1.5□□□□□ -2.17
CEF1Q03654 YBR221W-AYBR221W-A 105 nt1.5□□□□□ -2.17
CEF1Q03654 SEC3YER008C 4011 nt1.5□□□□□ -2.17
CEF1Q03654 EAF1YDR359C 2949 nt1.5□□□□□ -2.17
CEF1Q03654 CDC39YCR093W 6327 nt1.49□□□□□ -2.17
CEF1Q03654 PRP42YDR235W 1635 nt1.49□□□□□ -2.17
CEF1Q03654 YIL020C-AYIL020C-A 339 nt1.49□□□□□ -2.17
CEF1Q03654 STB6YKL072W 2301 nt1.48□□□□□ -2.17
CEF1Q03654 SDH6YDR379C-A 240 nt1.48□□□□□ -2.17
CEF1Q03654 YIL002W-AYIL002W-A 210 nt1.48□□□□□ -2.17
CEF1Q03654 YER053C-AYER053C-A 114 nt1.47□□□□□ -2.17
CEF1Q03654 tH(GUG)E1tH(GUG)E1 72 nt1.46□□□□□ -2.18
CEF1Q03654 tH(GUG)E2tH(GUG)E2 72 nt1.46□□□□□ -2.18
CEF1Q03654 tH(GUG)G1tH(GUG)G1 72 nt1.46□□□□□ -2.18
CEF1Q03654 tH(GUG)G2tH(GUG)G2 72 nt1.46□□□□□ -2.18
CEF1Q03654 tH(GUG)HtH(GUG)H 72 nt1.46□□□□□ -2.18
CEF1Q03654 tH(GUG)KtH(GUG)K 72 nt1.46□□□□□ -2.18
CEF1Q03654 tH(GUG)MtH(GUG)M 72 nt1.46□□□□□ -2.18
CEF1Q03654 YGR164WYGR164W 336 nt1.46□□□□□ -2.18
CEF1Q03654 tQ(UUG)E2tQ(UUG)E2 72 nt1.46□□□□□ -2.18
CEF1Q03654 YOR161W-AYOR161W-A 81 nt1.46□□□□□ -2.18
CEF1Q03654 YFR012W-AYFR012W-A 87 nt1.45□□□□□ -2.18
CEF1Q03654 GEA2YEL022W 4380 nt1.45□□□□□ -2.18
CEF1Q03654 YGL123C-AYGL123C-A 231 nt1.44□□□□□ -2.18
CEF1Q03654 CMC4YMR194C-B 222 nt1.43□□□□□ -2.18
CEF1Q03654 WAR1YML076C 2835 nt1.42□□□□□ -2.18
CEF1Q03654 ASE1YOR058C 2658 nt1.42□□□□□ -2.18
CEF1Q03654 YBR200W-AYBR200W-A 165 nt1.41□□□□□ -2.18
CEF1Q03654 NOP9YJL010C 2001 nt1.4□□□□□ -2.18
CEF1Q03654 SMC1YFL008W 3678 nt1.39□□□□□ -2.19
CEF1Q03654 MSH3YCR092C 3057 nt1.39□□□□□ -2.19
CEF1Q03654 PRP5YBR237W 2550 nt1.39□□□□□ -2.19
CEF1Q03654 YHL015W-AYHL015W-A 84 nt1.38□□□□□ -2.19
CEF1Q03654 YLR282CYLR282C 342 nt1.38□□□□□ -2.19
CEF1Q03654 BFR2YDR299W 1605 nt1.37□□□□□ -2.19
CEF1Q03654 ROM2YLR371W 4071 nt1.37□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms