Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 COG4YPR105C 2586 nt2.06□□□□□ -2.08
NPL3Q01560 RGA1YOR127W 3024 nt2.06□□□□□ -2.08
NPL3Q01560 TOR2YKL203C 7425 nt2.06□□□□□ -2.08
NPL3Q01560 SPP41YDR464W 4308 nt2.05□□□□□ -2.08
NPL3Q01560 GYP5YPL249C 2685 nt2.05□□□□□ -2.08
NPL3Q01560 YOR019WYOR019W 2193 nt2.05□□□□□ -2.08
NPL3Q01560 UBR2YLR024C 5619 nt2.05□□□□□ -2.08
NPL3Q01560 YDR521WYDR521W 336 nt2.05□□□□□ -2.08
NPL3Q01560 SOM1YEL059C-A 225 nt2.04□□□□□ -2.08 RIP-Chip
NPL3Q01560 YJR039WYJR039W 3366 nt2.04□□□□□ -2.08
NPL3Q01560 SPO24YPR036W-A 204 nt2.04□□□□□ -2.08
NPL3Q01560 YDR354C-AYDR354C-A 144 nt2.03□□□□□ -2.08
NPL3Q01560 YBR206WYBR206W 324 nt2.03□□□□□ -2.08 RIP-Chip
NPL3Q01560 YER172C-AYER172C-A 381 nt2.02□□□□□ -2.09
NPL3Q01560 LHS1YKL073W 2646 nt2.02□□□□□ -2.09
NPL3Q01560 FAB1YFR019W 6837 nt2.01□□□□□ -2.09
NPL3Q01560 PRP5YBR237W 2550 nt2.01□□□□□ -2.09
NPL3Q01560 EMC5YIL027C 426 nt2.01□□□□□ -2.09
NPL3Q01560 COX12YLR038C 252 nt2.01□□□□□ -2.09
NPL3Q01560 DGR1YNL130C-A 147 nt2.01□□□□□ -2.09
NPL3Q01560 IFH1YLR223C 3258 nt2.01□□□□□ -2.09
NPL3Q01560 GCN2YDR283C 4980 nt2□□□□□ -2.09
NPL3Q01560 ADR1YDR216W 3972 nt1.99□□□□□ -2.09
NPL3Q01560 CHS6YJL099W 2241 nt1.99□□□□□ -2.09
NPL3Q01560 NUT1YGL151W 3399 nt1.98□□□□□ -2.09
NPL3Q01560 RAD50YNL250W 3939 nt1.98□□□□□ -2.09
NPL3Q01560 NEO1YIL048W 3456 nt1.97□□□□□ -2.09
NPL3Q01560 SEC31YDL195W 3822 nt1.97□□□□□ -2.09
NPL3Q01560 HSL1YKL101W 4557 nt1.97□□□□□ -2.09
NPL3Q01560 TMA7YLR262C-A 195 nt1.97□□□□□ -2.09
NPL3Q01560 YLL054CYLL054C 2532 nt1.95□□□□□ -2.1
NPL3Q01560 TRM3YDL112W 4311 nt1.95□□□□□ -2.1
NPL3Q01560 SKI3YPR189W 4299 nt1.95□□□□□ -2.1
NPL3Q01560 YHR214C-BYHR214C-B 5382 nt1.94□□□□□ -2.1
NPL3Q01560 IRC20YLR247C 4671 nt1.94□□□□□ -2.1
NPL3Q01560 YGR109W-BYGR109W-B 4644 nt1.94□□□□□ -2.1
NPL3Q01560 YIL002W-AYIL002W-A 210 nt1.94□□□□□ -2.1 RIP-Chip
NPL3Q01560 YLL066W-BYLL066W-B 171 nt1.94□□□□□ -2.1
NPL3Q01560 UFD2YDL190C 2886 nt1.94□□□□□ -2.1
NPL3Q01560 KIP1YBL063W 3336 nt1.94□□□□□ -2.1
NPL3Q01560 YJL026C-AYJL026C-A 222 nt1.93□□□□□ -2.1
NPL3Q01560 TTI1YKL033W 3117 nt1.93□□□□□ -2.1
NPL3Q01560 MYO2YOR326W 4725 nt1.93□□□□□ -2.1
NPL3Q01560 PEP1YBL017C 4740 nt1.92□□□□□ -2.1
NPL3Q01560 TBS1YBR150C 3285 nt1.92□□□□□ -2.1
NPL3Q01560 STF2YGR008C 255 nt1.91□□□□□ -2.1 RIP-Chip
NPL3Q01560 ALY2YJL084C 3141 nt1.91□□□□□ -2.1
NPL3Q01560 YDL206WYDL206W 2289 nt1.91□□□□□ -2.1
NPL3Q01560 BPH1YCR032W 6504 nt1.9□□□□□ -2.1
NPL3Q01560 SLX4YLR135W 2247 nt1.9□□□□□ -2.1
NPL3Q01560 YGL182CYGL182C 324 nt1.9□□□□□ -2.11
NPL3Q01560 tS(GCU)Q1tS(GCU)Q1 86 nt1.9□□□□□ -2.11
NPL3Q01560 MMS4YBR098W 2076 nt1.9□□□□□ -2.11
NPL3Q01560 APL1YJR005W 2103 nt1.9□□□□□ -2.11
NPL3Q01560 QCR9YGR183C 201 nt1.89□□□□□ -2.11
NPL3Q01560 snR45snR45 172 nt1.89□□□□□ -2.11
NPL3Q01560 MDS3YGL197W 4464 nt1.89□□□□□ -2.11
NPL3Q01560 SMC4YLR086W 4257 nt1.88□□□□□ -2.11
NPL3Q01560 KCS1YDR017C 3153 nt1.88□□□□□ -2.11
NPL3Q01560 UTP8YGR128C 2142 nt1.88□□□□□ -2.11
NPL3Q01560 PAN2YGL094C 3348 nt1.87□□□□□ -2.11
NPL3Q01560 YAL067W-AYAL067W-A 228 nt1.86□□□□□ -2.11
NPL3Q01560 YOR093CYOR093C 4947 nt1.85□□□□□ -2.11
NPL3Q01560 YHR131W-AYHR131W-A 246 nt1.85□□□□□ -2.11
NPL3Q01560 SAC3YDR159W 3906 nt1.84□□□□□ -2.11
NPL3Q01560 IRA1YBR140C 9279 nt1.84□□□□□ -2.12
NPL3Q01560 YCS4YLR272C 3531 nt1.83□□□□□ -2.12
NPL3Q01560 RCO1YMR075W 2055 nt1.83□□□□□ -2.12
NPL3Q01560 PKH3YDR466W 2697 nt1.83□□□□□ -2.12
NPL3Q01560 STB6YKL072W 2301 nt1.82□□□□□ -2.12
NPL3Q01560 YLL020CYLL020C 306 nt1.82□□□□□ -2.12
NPL3Q01560 snR39BsnR39B 96 nt1.82□□□□□ -2.12
NPL3Q01560 MON2YNL297C 4911 nt1.81□□□□□ -2.12
NPL3Q01560 VPS15YBR097W 4365 nt1.81□□□□□ -2.12
NPL3Q01560 YGL123C-AYGL123C-A 231 nt1.81□□□□□ -2.12
NPL3Q01560 YBL039C-AYBL039C-A 84 nt1.81□□□□□ -2.12
NPL3Q01560 YMR272W-BYMR272W-B 108 nt1.81□□□□□ -2.12
NPL3Q01560 snR14snR14 160 nt1.81□□□□□ -2.12
NPL3Q01560 YLR419WYLR419W 4308 nt1.8□□□□□ -2.12
NPL3Q01560 SMC1YFL008W 3678 nt1.8□□□□□ -2.12
NPL3Q01560 YAR009CYAR009C 3591 nt1.8□□□□□ -2.12
NPL3Q01560 NUP157YER105C 4176 nt1.79□□□□□ -2.12
NPL3Q01560 RTP1YMR185W 2946 nt1.78□□□□□ -2.12
NPL3Q01560 BFR2YDR299W 1605 nt1.78□□□□□ -2.12
NPL3Q01560 KAP122YGL016W 3246 nt1.77□□□□□ -2.13
NPL3Q01560 TAH1YCR060W 336 nt1.77□□□□□ -2.13 RIP-Chip
NPL3Q01560 snR81snR81 201 nt1.77□□□□□ -2.13
NPL3Q01560 COA6YMR244C-A 315 nt1.77□□□□□ -2.13 RIP-Chip
NPL3Q01560 YLR422WYLR422W 5799 nt1.77□□□□□ -2.13
NPL3Q01560 RSM22YKL155C 1887 nt1.76□□□□□ -2.13
NPL3Q01560 tM(CAU)Q2tM(CAU)Q2 78 nt1.76□□□□□ -2.13
NPL3Q01560 YMR247W-AYMR247W-A 144 nt1.76□□□□□ -2.13
NPL3Q01560 YOR161W-AYOR161W-A 81 nt1.76□□□□□ -2.13
NPL3Q01560 POL5YEL055C 3069 nt1.76□□□□□ -2.13
NPL3Q01560 BST1YFL025C 3090 nt1.75□□□□□ -2.13
NPL3Q01560 MEC1YBR136W 7107 nt1.75□□□□□ -2.13
NPL3Q01560 STO1YMR125W 2586 nt1.73□□□□□ -2.13
NPL3Q01560 CFT1YDR301W 4074 nt1.73□□□□□ -2.13
NPL3Q01560 YKL100W-AYKL100W-A 90 nt1.73□□□□□ -2.13
NPL3Q01560 SET3YKR029C 2256 nt1.73□□□□□ -2.13
Retrieved 100 of 7,029 protein–RNA pairs in 69.1 ms