Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3EP60228 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
EIF3EP60228 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
EIF3EP60228 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 AC007322.1-201ENST00000426983 750 ntBASIC20.66■□□□□ 0.9
EIF3EP60228 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.66■□□□□ 0.9
EIF3EP60228 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
EIF3EP60228 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
EIF3EP60228 AC105020.6-201ENST00000621523 1217 ntBASIC20.66■□□□□ 0.9
EIF3EP60228 AC231657.2-201ENST00000624556 255 ntBASIC20.66■□□□□ 0.9
EIF3EP60228 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.66■□□□□ 0.9
EIF3EP60228 AC008694.1-202ENST00000636953 945 ntBASIC20.66■□□□□ 0.9
EIF3EP60228 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
EIF3EP60228 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 PTBP1P-201ENST00000554374 1601 ntBASIC20.66■□□□□ 0.9
EIF3EP60228 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
EIF3EP60228 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3EP60228 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3EP60228 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3EP60228 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.65■□□□□ 0.9
EIF3EP60228 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EIF3EP60228 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3EP60228 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3EP60228 TMEM179-206ENST00000616017 1645 ntBASIC20.65■□□□□ 0.9
EIF3EP60228 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3EP60228 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.65■□□□□ 0.9
EIF3EP60228 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3EP60228 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.65■□□□□ 0.9
EIF3EP60228 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.65■□□□□ 0.9
EIF3EP60228 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.65■□□□□ 0.9
EIF3EP60228 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3EP60228 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.65■□□□□ 0.9
EIF3EP60228 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3EP60228 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.65■□□□□ 0.9
EIF3EP60228 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3EP60228 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.65■□□□□ 0.9
EIF3EP60228 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EIF3EP60228 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EIF3EP60228 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.64■□□□□ 0.89
EIF3EP60228 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.64■□□□□ 0.89
EIF3EP60228 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EIF3EP60228 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EIF3EP60228 AL355472.2-201ENST00000422958 438 ntBASIC20.64■□□□□ 0.89
EIF3EP60228 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EIF3EP60228 CYP2T3P-201ENST00000601990 817 ntBASIC20.64■□□□□ 0.89
EIF3EP60228 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.64■□□□□ 0.89
EIF3EP60228 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EIF3EP60228 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
EIF3EP60228 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EIF3EP60228 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.64■□□□□ 0.89
EIF3EP60228 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.64■□□□□ 0.89
EIF3EP60228 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.64■□□□□ 0.89
EIF3EP60228 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EIF3EP60228 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EIF3EP60228 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EIF3EP60228 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EIF3EP60228 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
EIF3EP60228 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
EIF3EP60228 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EIF3EP60228 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.63■□□□□ 0.89
EIF3EP60228 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
EIF3EP60228 AC022517.1-201ENST00000592429 346 ntBASIC20.63■□□□□ 0.89
EIF3EP60228 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.63■□□□□ 0.89
EIF3EP60228 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EIF3EP60228 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EIF3EP60228 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.63■□□□□ 0.89
EIF3EP60228 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.63■□□□□ 0.89
EIF3EP60228 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EIF3EP60228 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
EIF3EP60228 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.62■□□□□ 0.89
EIF3EP60228 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EIF3EP60228 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EIF3EP60228 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.62■□□□□ 0.89
EIF3EP60228 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.62■□□□□ 0.89
EIF3EP60228 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EIF3EP60228 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.62■□□□□ 0.89
EIF3EP60228 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.62■□□□□ 0.89
EIF3EP60228 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EIF3EP60228 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EIF3EP60228 AL158211.5-201ENST00000623583 2518 ntBASIC20.62■□□□□ 0.89
EIF3EP60228 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EIF3EP60228 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.62■□□□□ 0.89
EIF3EP60228 KRT8P17-201ENST00000453110 1448 ntBASIC20.61■□□□□ 0.89
EIF3EP60228 AC007952.6-201ENST00000573168 2673 ntBASIC20.61■□□□□ 0.89
EIF3EP60228 AC003957.1-201ENST00000625108 2673 ntBASIC20.61■□□□□ 0.89
EIF3EP60228 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms