Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC128676.1-201ENST00000454392 318 ntBASIC19.16■□□□□ 0.66
VSX2P58304 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.16■□□□□ 0.66
VSX2P58304 AC008687.6-201ENST00000596318 630 ntBASIC19.16■□□□□ 0.66
VSX2P58304 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VSX2P58304 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.16■□□□□ 0.66
VSX2P58304 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
VSX2P58304 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
VSX2P58304 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.16■□□□□ 0.66
VSX2P58304 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VSX2P58304 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.16■□□□□ 0.66
VSX2P58304 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VSX2P58304 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VSX2P58304 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
VSX2P58304 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.15■□□□□ 0.66
VSX2P58304 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.15■□□□□ 0.66
VSX2P58304 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.15■□□□□ 0.66
VSX2P58304 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
VSX2P58304 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.15■□□□□ 0.66
VSX2P58304 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
VSX2P58304 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VSX2P58304 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
VSX2P58304 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.14■□□□□ 0.66
VSX2P58304 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
VSX2P58304 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VSX2P58304 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VSX2P58304 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.14■□□□□ 0.65
VSX2P58304 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VSX2P58304 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VSX2P58304 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.14■□□□□ 0.65
VSX2P58304 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VSX2P58304 KRT17P3-201ENST00000420566 1262 ntBASIC19.14■□□□□ 0.65
VSX2P58304 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
VSX2P58304 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.14■□□□□ 0.65
VSX2P58304 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VSX2P58304 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.14■□□□□ 0.65
VSX2P58304 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
VSX2P58304 AC073648.6-201ENST00000641589 218 ntBASIC19.14■□□□□ 0.65
VSX2P58304 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.14■□□□□ 0.65
VSX2P58304 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
VSX2P58304 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VSX2P58304 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VSX2P58304 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
VSX2P58304 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.14■□□□□ 0.65
VSX2P58304 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VSX2P58304 SMG8-203ENST00000578922 2178 ntBASIC19.13■□□□□ 0.65
VSX2P58304 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VSX2P58304 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VSX2P58304 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VSX2P58304 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VSX2P58304 RNF165-205ENST00000588679 2904 ntBASIC19.13■□□□□ 0.65
VSX2P58304 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
VSX2P58304 HLA-G-202ENST00000376815 851 ntBASIC19.13■□□□□ 0.65
VSX2P58304 HLA-G-203ENST00000376818 1127 ntBASIC19.13■□□□□ 0.65
VSX2P58304 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.13■□□□□ 0.65
VSX2P58304 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VSX2P58304 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.13■□□□□ 0.65
VSX2P58304 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
VSX2P58304 AL031963.3-201ENST00000606441 850 ntBASIC19.13■□□□□ 0.65
VSX2P58304 AC120498.8-201ENST00000614275 531 ntBASIC19.13■□□□□ 0.65
VSX2P58304 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VSX2P58304 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VSX2P58304 KRT8P20-201ENST00000423953 1409 ntBASIC19.13■□□□□ 0.65
VSX2P58304 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
VSX2P58304 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.13■□□□□ 0.65
VSX2P58304 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
VSX2P58304 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.13■□□□□ 0.65
VSX2P58304 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.13■□□□□ 0.65
VSX2P58304 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.13■□□□□ 0.65
VSX2P58304 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.13■□□□□ 0.65
VSX2P58304 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
VSX2P58304 AC073314.1-201ENST00000568729 2216 ntBASIC19.13■□□□□ 0.65
VSX2P58304 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
VSX2P58304 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VSX2P58304 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VSX2P58304 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VSX2P58304 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VSX2P58304 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VSX2P58304 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VSX2P58304 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VSX2P58304 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VSX2P58304 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VSX2P58304 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VSX2P58304 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.12■□□□□ 0.65
VSX2P58304 PRORSD1P-201ENST00000295112 541 ntBASIC19.12■□□□□ 0.65
VSX2P58304 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VSX2P58304 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms