Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EMP3P54852 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EMP3P54852 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EMP3P54852 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
EMP3P54852 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
EMP3P54852 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EMP3P54852 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EMP3P54852 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
EMP3P54852 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EMP3P54852 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
EMP3P54852 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
EMP3P54852 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
EMP3P54852 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EMP3P54852 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
EMP3P54852 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.39■□□□□ 0.69
EMP3P54852 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.39■□□□□ 0.69
EMP3P54852 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
EMP3P54852 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.39■□□□□ 0.69
EMP3P54852 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.39■□□□□ 0.69
EMP3P54852 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
EMP3P54852 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
EMP3P54852 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
EMP3P54852 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
EMP3P54852 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.39■□□□□ 0.69
EMP3P54852 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.39■□□□□ 0.69
EMP3P54852 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
EMP3P54852 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.39■□□□□ 0.69
EMP3P54852 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EMP3P54852 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
EMP3P54852 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.38■□□□□ 0.69
EMP3P54852 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.38■□□□□ 0.69
EMP3P54852 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.38■□□□□ 0.69
EMP3P54852 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.38■□□□□ 0.69
EMP3P54852 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EMP3P54852 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.38■□□□□ 0.69
EMP3P54852 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.38■□□□□ 0.69
EMP3P54852 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
EMP3P54852 AC083880.1-201ENST00000608266 535 ntBASIC19.38■□□□□ 0.69
EMP3P54852 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
EMP3P54852 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.38■□□□□ 0.69
EMP3P54852 MIR2861-201ENST00000636310 90 ntBASIC19.38■□□□□ 0.69
EMP3P54852 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
EMP3P54852 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EMP3P54852 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.37■□□□□ 0.69
EMP3P54852 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EMP3P54852 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
EMP3P54852 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EMP3P54852 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EMP3P54852 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.37■□□□□ 0.69
EMP3P54852 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EMP3P54852 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.37■□□□□ 0.69
EMP3P54852 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.37■□□□□ 0.69
EMP3P54852 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC19.37■□□□□ 0.69
EMP3P54852 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EMP3P54852 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.37■□□□□ 0.69
EMP3P54852 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EMP3P54852 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EMP3P54852 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EMP3P54852 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
EMP3P54852 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
EMP3P54852 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EMP3P54852 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
EMP3P54852 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.36■□□□□ 0.69
EMP3P54852 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC19.36■□□□□ 0.69
EMP3P54852 CD99P1-205ENST00000527459 561 ntBASIC19.36■□□□□ 0.69
EMP3P54852 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.36■□□□□ 0.69
EMP3P54852 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.36■□□□□ 0.69
EMP3P54852 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
EMP3P54852 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.36■□□□□ 0.69
EMP3P54852 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.36■□□□□ 0.69
EMP3P54852 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms