Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUBP1P53384 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUBP1P53384 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUBP1P53384 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUBP1P53384 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.05■□□□□ 0.8
NUBP1P53384 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.05■□□□□ 0.8
NUBP1P53384 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUBP1P53384 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NUBP1P53384 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.04■□□□□ 0.8
NUBP1P53384 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NUBP1P53384 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUBP1P53384 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUBP1P53384 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUBP1P53384 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.04■□□□□ 0.8
NUBP1P53384 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUBP1P53384 COA4-204ENST00000541455 1038 ntTSL 5 BASIC20.04■□□□□ 0.8
NUBP1P53384 AL136038.3-201ENST00000561909 1096 ntBASIC20.04■□□□□ 0.8
NUBP1P53384 C1QL1P1-201ENST00000568105 661 ntBASIC20.04■□□□□ 0.8
NUBP1P53384 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.04■□□□□ 0.8
NUBP1P53384 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NUBP1P53384 AP000692.2-201ENST00000608391 879 ntBASIC20.04■□□□□ 0.8
NUBP1P53384 AC130371.2-201ENST00000619443 611 ntBASIC20.04■□□□□ 0.8
NUBP1P53384 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.04■□□□□ 0.8
NUBP1P53384 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUBP1P53384 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUBP1P53384 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUBP1P53384 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.04■□□□□ 0.8
NUBP1P53384 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUBP1P53384 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NUBP1P53384 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.03■□□□□ 0.8
NUBP1P53384 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NUBP1P53384 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUBP1P53384 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUBP1P53384 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NUBP1P53384 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NUBP1P53384 AC011506.1-201ENST00000474329 610 ntBASIC20.03■□□□□ 0.8
NUBP1P53384 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC20.03■□□□□ 0.8
NUBP1P53384 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.03■□□□□ 0.8
NUBP1P53384 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.03■□□□□ 0.8
NUBP1P53384 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.03■□□□□ 0.8
NUBP1P53384 AC131212.4-201ENST00000623606 975 ntBASIC20.03■□□□□ 0.8
NUBP1P53384 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUBP1P53384 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUBP1P53384 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUBP1P53384 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.02■□□□□ 0.8
NUBP1P53384 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUBP1P53384 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUBP1P53384 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.02■□□□□ 0.8
NUBP1P53384 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUBP1P53384 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUBP1P53384 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.02■□□□□ 0.8
NUBP1P53384 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.02■□□□□ 0.8
NUBP1P53384 AP000593.1-201ENST00000393668 712 ntBASIC20.02■□□□□ 0.8
NUBP1P53384 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.02■□□□□ 0.8
NUBP1P53384 KRT18P16-201ENST00000510337 1294 ntBASIC20.02■□□□□ 0.8
NUBP1P53384 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.02■□□□□ 0.8
NUBP1P53384 AC008622.2-201ENST00000617006 1229 ntBASIC20.02■□□□□ 0.8
NUBP1P53384 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.02■□□□□ 0.8
NUBP1P53384 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUBP1P53384 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
NUBP1P53384 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUBP1P53384 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.02■□□□□ 0.79
NUBP1P53384 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.02■□□□□ 0.79
NUBP1P53384 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUBP1P53384 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.01■□□□□ 0.79
NUBP1P53384 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUBP1P53384 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUBP1P53384 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUBP1P53384 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUBP1P53384 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUBP1P53384 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUBP1P53384 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.01■□□□□ 0.79
NUBP1P53384 ATP5G2P1-201ENST00000433580 426 ntBASIC20.01■□□□□ 0.79
NUBP1P53384 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.01■□□□□ 0.79
NUBP1P53384 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.01■□□□□ 0.79
NUBP1P53384 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.01■□□□□ 0.79
NUBP1P53384 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUBP1P53384 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.01■□□□□ 0.79
NUBP1P53384 AC023511.2-201ENST00000618803 211 ntBASIC20.01■□□□□ 0.79
NUBP1P53384 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC20.01■□□□□ 0.79
NUBP1P53384 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
NUBP1P53384 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NUBP1P53384 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NUBP1P53384 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUBP1P53384 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.01■□□□□ 0.79
NUBP1P53384 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUBP1P53384 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUBP1P53384 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20■□□□□ 0.79
NUBP1P53384 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20■□□□□ 0.79
NUBP1P53384 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
NUBP1P53384 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUBP1P53384 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20■□□□□ 0.79
NUBP1P53384 HLA-G-202ENST00000376815 851 ntBASIC20■□□□□ 0.79
NUBP1P53384 HLA-G-203ENST00000376818 1127 ntBASIC20■□□□□ 0.79
NUBP1P53384 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20■□□□□ 0.79
NUBP1P53384 AC246785.2-201ENST00000432512 513 ntBASIC20■□□□□ 0.79
NUBP1P53384 FAAHP1-202ENST00000446499 1238 ntBASIC20■□□□□ 0.79
NUBP1P53384 KRT17P6-201ENST00000453795 1220 ntBASIC20■□□□□ 0.79
NUBP1P53384 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NUBP1P53384 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms