Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC25A1P53007 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC25A1P53007 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC25A1P53007 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC25A1P53007 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC25A1P53007 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SLC25A1P53007 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLC25A1P53007 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
SLC25A1P53007 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC25A1P53007 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 AC137761.2-201ENST00000561729 223 ntBASIC17.79■□□□□ 0.44
SLC25A1P53007 AC145350.3-201ENST00000569033 163 ntBASIC17.79■□□□□ 0.44
SLC25A1P53007 AL031963.3-201ENST00000606441 850 ntBASIC17.79■□□□□ 0.44
SLC25A1P53007 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC25A1P53007 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC25A1P53007 KRT16P6-202ENST00000425692 1426 ntBASIC17.79■□□□□ 0.44
SLC25A1P53007 BX323043.1-201ENST00000641006 1765 ntBASIC17.79■□□□□ 0.44
SLC25A1P53007 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC25A1P53007 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC25A1P53007 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC25A1P53007 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC25A1P53007 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC25A1P53007 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC25A1P53007 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC25A1P53007 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC25A1P53007 AC105020.6-201ENST00000621523 1217 ntBASIC17.78■□□□□ 0.44
SLC25A1P53007 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC25A1P53007 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC25A1P53007 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC25A1P53007 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC25A1P53007 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC25A1P53007 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC25A1P53007 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC25A1P53007 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC25A1P53007 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC25A1P53007 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SLC25A1P53007 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC25A1P53007 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC25A1P53007 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC25A1P53007 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC25A1P53007 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SLC25A1P53007 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC25A1P53007 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC25A1P53007 CNN2P6-201ENST00000439038 900 ntBASIC17.77■□□□□ 0.44
SLC25A1P53007 AC068338.2-201ENST00000563278 1430 ntBASIC17.77■□□□□ 0.44
SLC25A1P53007 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC25A1P53007 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC25A1P53007 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC25A1P53007 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC25A1P53007 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC25A1P53007 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SLC25A1P53007 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC25A1P53007 KRT8P20-201ENST00000423953 1409 ntBASIC17.76■□□□□ 0.43
SLC25A1P53007 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC25A1P53007 KRT18P68-201ENST00000392293 1000 ntBASIC17.76■□□□□ 0.43
SLC25A1P53007 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC25A1P53007 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC25A1P53007 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SLC25A1P53007 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.76■□□□□ 0.43
SLC25A1P53007 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC25A1P53007 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC25A1P53007 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC25A1P53007 AC087623.3-201ENST00000607047 1098 ntBASIC17.76■□□□□ 0.43
SLC25A1P53007 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC25A1P53007 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SLC25A1P53007 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC25A1P53007 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC25A1P53007 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC25A1P53007 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC25A1P53007 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC25A1P53007 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC25A1P53007 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC25A1P53007 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC25A1P53007 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC25A1P53007 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC25A1P53007 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC25A1P53007 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SLC25A1P53007 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SLC25A1P53007 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC25A1P53007 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms