Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDR1P51861 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.81■■□□□ 1.08
CDR1P51861 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.81■■□□□ 1.08
CDR1P51861 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.81■■□□□ 1.08
CDR1P51861 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.81■■□□□ 1.08
CDR1P51861 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.81■■□□□ 1.08
CDR1P51861 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CDR1P51861 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CDR1P51861 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDR1P51861 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDR1P51861 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.8■■□□□ 1.08
CDR1P51861 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDR1P51861 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDR1P51861 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDR1P51861 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDR1P51861 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.8■■□□□ 1.08
CDR1P51861 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDR1P51861 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.8■■□□□ 1.08
CDR1P51861 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDR1P51861 KRT18P68-201ENST00000392293 1000 ntBASIC21.8■■□□□ 1.08
CDR1P51861 MCRIP2P1-201ENST00000394346 511 ntBASIC21.8■■□□□ 1.08
CDR1P51861 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDR1P51861 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.8■■□□□ 1.08
CDR1P51861 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.8■■□□□ 1.08
CDR1P51861 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDR1P51861 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDR1P51861 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.8■■□□□ 1.08
CDR1P51861 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDR1P51861 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.8■■□□□ 1.08
CDR1P51861 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CDR1P51861 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.8■■□□□ 1.08
CDR1P51861 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 FAM201B-201ENST00000458407 597 ntBASIC21.79■■□□□ 1.08
CDR1P51861 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.79■■□□□ 1.08
CDR1P51861 TMEM191A-211ENST00000637163 1067 ntBASIC21.79■■□□□ 1.08
CDR1P51861 LINC01006-201ENST00000333319 2292 ntBASIC21.79■■□□□ 1.08
CDR1P51861 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.79■■□□□ 1.08
CDR1P51861 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.79■■□□□ 1.08
CDR1P51861 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CDR1P51861 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDR1P51861 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
CDR1P51861 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CDR1P51861 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.78■■□□□ 1.08
CDR1P51861 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.78■■□□□ 1.08
CDR1P51861 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.78■■□□□ 1.08
CDR1P51861 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CDR1P51861 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CDR1P51861 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDR1P51861 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.78■■□□□ 1.08
CDR1P51861 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.78■■□□□ 1.08
CDR1P51861 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDR1P51861 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDR1P51861 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDR1P51861 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDR1P51861 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDR1P51861 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
CDR1P51861 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDR1P51861 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.77■■□□□ 1.08
CDR1P51861 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDR1P51861 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDR1P51861 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.77■■□□□ 1.08
CDR1P51861 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDR1P51861 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms