Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFSF9P41273 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TNFSF9P41273 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFSF9P41273 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TNFSF9P41273 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TNFSF9P41273 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.72■■□□□ 1.07
TNFSF9P41273 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF9P41273 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF9P41273 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TNFSF9P41273 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TNFSF9P41273 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.72■■□□□ 1.07
TNFSF9P41273 RPS2P52-201ENST00000469610 820 ntBASIC21.72■■□□□ 1.07
TNFSF9P41273 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF9P41273 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.72■■□□□ 1.07
TNFSF9P41273 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.72■■□□□ 1.07
TNFSF9P41273 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF9P41273 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TNFSF9P41273 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF9P41273 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.72■■□□□ 1.07
TNFSF9P41273 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFSF9P41273 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.72■■□□□ 1.07
TNFSF9P41273 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
TNFSF9P41273 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFSF9P41273 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TNFSF9P41273 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.71■■□□□ 1.07
TNFSF9P41273 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
TNFSF9P41273 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFSF9P41273 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TNFSF9P41273 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TNFSF9P41273 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TNFSF9P41273 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.71■■□□□ 1.07
TNFSF9P41273 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.71■■□□□ 1.07
TNFSF9P41273 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.71■■□□□ 1.07
TNFSF9P41273 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TNFSF9P41273 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNFSF9P41273 AL162377.1-201ENST00000618844 1793 ntBASIC21.71■■□□□ 1.07
TNFSF9P41273 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNFSF9P41273 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.7■■□□□ 1.06
TNFSF9P41273 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.7■■□□□ 1.06
TNFSF9P41273 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.7■■□□□ 1.06
TNFSF9P41273 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.7■■□□□ 1.06
TNFSF9P41273 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.7■■□□□ 1.06
TNFSF9P41273 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TNFSF9P41273 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.7■■□□□ 1.06
TNFSF9P41273 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TNFSF9P41273 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFSF9P41273 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.7■■□□□ 1.06
TNFSF9P41273 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
TNFSF9P41273 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFSF9P41273 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFSF9P41273 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TNFSF9P41273 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF9P41273 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF9P41273 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFSF9P41273 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TNFSF9P41273 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFSF9P41273 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF9P41273 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFSF9P41273 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF9P41273 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.69■■□□□ 1.06
TNFSF9P41273 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF9P41273 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.69■■□□□ 1.06
TNFSF9P41273 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TNFSF9P41273 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFSF9P41273 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFSF9P41273 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
TNFSF9P41273 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF9P41273 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFSF9P41273 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF9P41273 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TNFSF9P41273 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF9P41273 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFSF9P41273 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFSF9P41273 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
TNFSF9P41273 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFSF9P41273 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF9P41273 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.68■■□□□ 1.06
TNFSF9P41273 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF9P41273 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF9P41273 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TNFSF9P41273 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF9P41273 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFSF9P41273 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF9P41273 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF9P41273 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFSF9P41273 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFSF9P41273 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms