Protein–RNA interactions for Protein: P40558

CFD1, Cytosolic Fe-S cluster assembly factor CFD1, yeastyeast

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CFD1P40558 SEY1YOR165W 2331 nt1.56□□□□□ -2.16
CFD1P40558 IFH1YLR223C 3258 nt1.55□□□□□ -2.16
CFD1P40558 YCR038W-AYCR038W-A 126 nt1.55□□□□□ -2.16
CFD1P40558 RAD50YNL250W 3939 nt1.55□□□□□ -2.16
CFD1P40558 SEC63YOR254C 1992 nt1.55□□□□□ -2.16
CFD1P40558 RTP1YMR185W 2946 nt1.55□□□□□ -2.16
CFD1P40558 TBS1YBR150C 3285 nt1.55□□□□□ -2.16
CFD1P40558 NUP157YER105C 4176 nt1.55□□□□□ -2.16
CFD1P40558 YJL026C-AYJL026C-A 222 nt1.54□□□□□ -2.16
CFD1P40558 CDC31YOR257W 486 nt1.54□□□□□ -2.16
CFD1P40558 YPL044CYPL044C 549 nt1.54□□□□□ -2.16
CFD1P40558 HAL9YOL089C 3093 nt1.54□□□□□ -2.16
CFD1P40558 ADR1YDR216W 3972 nt1.54□□□□□ -2.16
CFD1P40558 PAA1YDR071C 576 nt1.53□□□□□ -2.16
CFD1P40558 SMC4YLR086W 4257 nt1.53□□□□□ -2.16
CFD1P40558 COX12YLR038C 252 nt1.52□□□□□ -2.17
CFD1P40558 YDL206WYDL206W 2289 nt1.51□□□□□ -2.17
CFD1P40558 YLR422WYLR422W 5799 nt1.5□□□□□ -2.17
CFD1P40558 snR85snR85 171 nt1.5□□□□□ -2.17
CFD1P40558 snR14snR14 160 nt1.5□□□□□ -2.17
CFD1P40558 YJR039WYJR039W 3366 nt1.5□□□□□ -2.17
CFD1P40558 PMD1YER132C 5262 nt1.49□□□□□ -2.17
CFD1P40558 YHL015W-AYHL015W-A 84 nt1.49□□□□□ -2.17
CFD1P40558 BRR2YER172C 6492 nt1.48□□□□□ -2.17
CFD1P40558 SLX4YLR135W 2247 nt1.47□□□□□ -2.17
CFD1P40558 EMC5YIL027C 426 nt1.46□□□□□ -2.18
CFD1P40558 YOR102WYOR102W 351 nt1.46□□□□□ -2.18
CFD1P40558 APL1YJR005W 2103 nt1.46□□□□□ -2.18
CFD1P40558 SNU13YEL026W 381 nt1.45□□□□□ -2.18
CFD1P40558 SSK2YNR031C 4740 nt1.45□□□□□ -2.18
CFD1P40558 TTI1YKL033W 3117 nt1.45□□□□□ -2.18
CFD1P40558 NUT1YGL151W 3399 nt1.44□□□□□ -2.18
CFD1P40558 YJL022WYJL022W 309 nt1.44□□□□□ -2.18
CFD1P40558 YBR221W-AYBR221W-A 105 nt1.44□□□□□ -2.18
CFD1P40558 CHS1YNL192W 3396 nt1.44□□□□□ -2.18
CFD1P40558 UFD2YDL190C 2886 nt1.44□□□□□ -2.18
CFD1P40558 CAT8YMR280C 4302 nt1.44□□□□□ -2.18
CFD1P40558 YLL054CYLL054C 2532 nt1.43□□□□□ -2.18
CFD1P40558 TDA9YML081W 3756 nt1.43□□□□□ -2.18
CFD1P40558 SPC110YDR356W 2835 nt1.43□□□□□ -2.18
CFD1P40558 YER053C-AYER053C-A 114 nt1.43□□□□□ -2.18
CFD1P40558 YIL002W-AYIL002W-A 210 nt1.43□□□□□ -2.18
CFD1P40558 YNL211CYNL211C 261 nt1.43□□□□□ -2.18
CFD1P40558 YAL067W-AYAL067W-A 228 nt1.42□□□□□ -2.18
CFD1P40558 IRA1YBR140C 9279 nt1.42□□□□□ -2.18
CFD1P40558 POL5YEL055C 3069 nt1.41□□□□□ -2.18
CFD1P40558 PRP5YBR237W 2550 nt1.41□□□□□ -2.18
CFD1P40558 YCL001W-BYCL001W-B 255 nt1.41□□□□□ -2.18
CFD1P40558 YAR009CYAR009C 3591 nt1.41□□□□□ -2.18
CFD1P40558 tL(UAA)QtL(UAA)Q 85 nt1.4□□□□□ -2.19
CFD1P40558 YOR161W-AYOR161W-A 81 nt1.4□□□□□ -2.19
CFD1P40558 YOR314W-AYOR314W-A 111 nt1.4□□□□□ -2.19
CFD1P40558 MMS4YBR098W 2076 nt1.39□□□□□ -2.19
CFD1P40558 GEA2YEL022W 4380 nt1.39□□□□□ -2.19
CFD1P40558 SMC1YFL008W 3678 nt1.39□□□□□ -2.19
CFD1P40558 YFR012W-AYFR012W-A 87 nt1.39□□□□□ -2.19
CFD1P40558 HUG1YML058W-A 207 nt1.39□□□□□ -2.19
CFD1P40558 SKI3YPR189W 4299 nt1.39□□□□□ -2.19
CFD1P40558 PET127YOR017W 2403 nt1.39□□□□□ -2.19
CFD1P40558 YOR019WYOR019W 2193 nt1.38□□□□□ -2.19
CFD1P40558 KCS1YDR017C 3153 nt1.38□□□□□ -2.19
CFD1P40558 FYV8YGR196C 2454 nt1.38□□□□□ -2.19
CFD1P40558 YGL123C-AYGL123C-A 231 nt1.38□□□□□ -2.19
CFD1P40558 STF2YGR008C 255 nt1.38□□□□□ -2.19
CFD1P40558 YOR329W-AYOR329W-A 210 nt1.38□□□□□ -2.19
CFD1P40558 ALY2YJL084C 3141 nt1.37□□□□□ -2.19
CFD1P40558 STO1YMR125W 2586 nt1.36□□□□□ -2.19
CFD1P40558 YGR130CYGR130C 2451 nt1.35□□□□□ -2.19
CFD1P40558 KAP122YGL016W 3246 nt1.35□□□□□ -2.19
CFD1P40558 HKR1YDR420W 5409 nt1.35□□□□□ -2.19
CFD1P40558 TRM732YMR259C 4263 nt1.35□□□□□ -2.19
CFD1P40558 SET3YKR029C 2256 nt1.35□□□□□ -2.19
CFD1P40558 RSM22YKL155C 1887 nt1.34□□□□□ -2.19
CFD1P40558 PIK1YNL267W 3201 nt1.34□□□□□ -2.2
CFD1P40558 YGL182CYGL182C 324 nt1.33□□□□□ -2.2
CFD1P40558 UTP8YGR128C 2142 nt1.33□□□□□ -2.2
CFD1P40558 PAN2YGL094C 3348 nt1.32□□□□□ -2.2
CFD1P40558 MEC1YBR136W 7107 nt1.32□□□□□ -2.2
CFD1P40558 BFR2YDR299W 1605 nt1.32□□□□□ -2.2
CFD1P40558 CCH1YGR217W 6120 nt1.32□□□□□ -2.2
CFD1P40558 NUP188YML103C 4968 nt1.31□□□□□ -2.2
CFD1P40558 MSH3YCR092C 3057 nt1.31□□□□□ -2.2
CFD1P40558 YLR282CYLR282C 342 nt1.31□□□□□ -2.2
CFD1P40558 CMC4YMR194C-B 222 nt1.31□□□□□ -2.2
CFD1P40558 WAR1YML076C 2835 nt1.3□□□□□ -2.2
CFD1P40558 CHS6YJL099W 2241 nt1.3□□□□□ -2.2
CFD1P40558 YBL039C-AYBL039C-A 84 nt1.3□□□□□ -2.2
CFD1P40558 STB6YKL072W 2301 nt1.29□□□□□ -2.2
CFD1P40558 tH(GUG)E1tH(GUG)E1 72 nt1.29□□□□□ -2.2
CFD1P40558 tH(GUG)E2tH(GUG)E2 72 nt1.29□□□□□ -2.2
CFD1P40558 tH(GUG)G1tH(GUG)G1 72 nt1.29□□□□□ -2.2
CFD1P40558 tH(GUG)G2tH(GUG)G2 72 nt1.29□□□□□ -2.2
CFD1P40558 tH(GUG)HtH(GUG)H 72 nt1.29□□□□□ -2.2
CFD1P40558 tH(GUG)KtH(GUG)K 72 nt1.29□□□□□ -2.2
CFD1P40558 tH(GUG)MtH(GUG)M 72 nt1.29□□□□□ -2.2
CFD1P40558 tQ(UUG)E2tQ(UUG)E2 72 nt1.29□□□□□ -2.2
CFD1P40558 YIL071W-AYIL071W-A 477 nt1.29□□□□□ -2.2
CFD1P40558 COX5BYIL111W 456 nt1.29□□□□□ -2.2
CFD1P40558 NOP9YJL010C 2001 nt1.28□□□□□ -2.2
CFD1P40558 TAH1YCR060W 336 nt1.27□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms