Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 TRS65YGR166W 1683 nt1.5□□□□□ -2.17
VPS41P38959 SMC1YFL008W 3678 nt1.49□□□□□ -2.17
VPS41P38959 KIP1YBL063W 3336 nt1.49□□□□□ -2.17
VPS41P38959 TRM3YDL112W 4311 nt1.49□□□□□ -2.17
VPS41P38959 YDL206WYDL206W 2289 nt1.49□□□□□ -2.17
VPS41P38959 YLL054CYLL054C 2532 nt1.48□□□□□ -2.17
VPS41P38959 SLX4YLR135W 2247 nt1.48□□□□□ -2.17
VPS41P38959 UFD2YDL190C 2886 nt1.48□□□□□ -2.17
VPS41P38959 PRP39YML046W 1890 nt1.48□□□□□ -2.17
VPS41P38959 IFH1YLR223C 3258 nt1.47□□□□□ -2.17
VPS41P38959 RSM22YKL155C 1887 nt1.46□□□□□ -2.18
VPS41P38959 PMD1YER132C 5262 nt1.45□□□□□ -2.18
VPS41P38959 snR46snR46 197 nt1.45□□□□□ -2.18
VPS41P38959 LAA1YJL207C 6045 nt1.45□□□□□ -2.18
VPS41P38959 EST2YLR318W 2655 nt1.44□□□□□ -2.18
VPS41P38959 MMS4YBR098W 2076 nt1.44□□□□□ -2.18
VPS41P38959 CAT8YMR280C 4302 nt1.44□□□□□ -2.18
VPS41P38959 YDR354C-AYDR354C-A 144 nt1.44□□□□□ -2.18
VPS41P38959 RPL33BYOR234C 324 nt1.43□□□□□ -2.18
VPS41P38959 snR14snR14 160 nt1.43□□□□□ -2.18
VPS41P38959 RAD9YDR217C 3930 nt1.42□□□□□ -2.18
VPS41P38959 MSN5YDR335W 3675 nt1.42□□□□□ -2.18
VPS41P38959 YJL022WYJL022W 309 nt1.42□□□□□ -2.18
VPS41P38959 MDS3YGL197W 4464 nt1.42□□□□□ -2.18
VPS41P38959 NUT1YGL151W 3399 nt1.42□□□□□ -2.18
VPS41P38959 KAP122YGL016W 3246 nt1.41□□□□□ -2.18
VPS41P38959 YIL020C-AYIL020C-A 339 nt1.41□□□□□ -2.18
VPS41P38959 YEL073CYEL073C 324 nt1.4□□□□□ -2.19
VPS41P38959 PMP1YCR024C-A 123 nt1.39□□□□□ -2.19
VPS41P38959 CDC25YLR310C 4770 nt1.39□□□□□ -2.19
VPS41P38959 APL1YJR005W 2103 nt1.39□□□□□ -2.19
VPS41P38959 AZF1YOR113W 2745 nt1.38□□□□□ -2.19
VPS41P38959 RPS30BYOR182C 192 nt1.38□□□□□ -2.19
VPS41P38959 COY1YKL179C 2040 nt1.38□□□□□ -2.19
VPS41P38959 PAA1YDR071C 576 nt1.37□□□□□ -2.19
VPS41P38959 YAR009CYAR009C 3591 nt1.37□□□□□ -2.19
VPS41P38959 YJL026C-AYJL026C-A 222 nt1.36□□□□□ -2.19
VPS41P38959 NUP192YJL039C 5052 nt1.36□□□□□ -2.19
VPS41P38959 YCR038W-AYCR038W-A 126 nt1.35□□□□□ -2.19
VPS41P38959 YNL211CYNL211C 261 nt1.35□□□□□ -2.19
VPS41P38959 YOR381W-AYOR381W-A 168 nt1.35□□□□□ -2.19
VPS41P38959 SEC3YER008C 4011 nt1.34□□□□□ -2.19
VPS41P38959 ALY2YJL084C 3141 nt1.34□□□□□ -2.19
VPS41P38959 STO1YMR125W 2586 nt1.34□□□□□ -2.19
VPS41P38959 GEA2YEL022W 4380 nt1.34□□□□□ -2.19
VPS41P38959 Q0092Q0092 141 nt1.34□□□□□ -2.19
VPS41P38959 CDC31YOR257W 486 nt1.34□□□□□ -2.19
VPS41P38959 TRM732YMR259C 4263 nt1.34□□□□□ -2.2
VPS41P38959 YDL007C-AYDL007C-A 258 nt1.33□□□□□ -2.2
VPS41P38959 CLU1YMR012W 3834 nt1.33□□□□□ -2.2
VPS41P38959 APL3YBL037W 3078 nt1.33□□□□□ -2.2
VPS41P38959 TTI1YKL033W 3117 nt1.33□□□□□ -2.2
VPS41P38959 WAR1YML076C 2835 nt1.32□□□□□ -2.2
VPS41P38959 YIL134C-AYIL134C-A 204 nt1.32□□□□□ -2.2
VPS41P38959 YAL067W-AYAL067W-A 228 nt1.32□□□□□ -2.2
VPS41P38959 YBR221W-AYBR221W-A 105 nt1.32□□□□□ -2.2
VPS41P38959 PAN2YGL094C 3348 nt1.32□□□□□ -2.2
VPS41P38959 SET3YKR029C 2256 nt1.31□□□□□ -2.2
VPS41P38959 COX12YLR038C 252 nt1.31□□□□□ -2.2
VPS41P38959 YOR161W-BYOR161W-B 261 nt1.31□□□□□ -2.2
VPS41P38959 EAF1YDR359C 2949 nt1.3□□□□□ -2.2
VPS41P38959 MSH3YCR092C 3057 nt1.29□□□□□ -2.2
VPS41P38959 HAL9YOL089C 3093 nt1.28□□□□□ -2.2
VPS41P38959 YPL044CYPL044C 549 nt1.28□□□□□ -2.2
VPS41P38959 YGL123C-AYGL123C-A 231 nt1.27□□□□□ -2.21
VPS41P38959 YOR170WYOR170W 306 nt1.27□□□□□ -2.21
VPS41P38959 SWI4YER111C 3282 nt1.26□□□□□ -2.21
VPS41P38959 UTP8YGR128C 2142 nt1.26□□□□□ -2.21
VPS41P38959 YIL002W-AYIL002W-A 210 nt1.26□□□□□ -2.21
VPS41P38959 CMC4YMR194C-B 222 nt1.26□□□□□ -2.21
VPS41P38959 YBR200W-AYBR200W-A 165 nt1.26□□□□□ -2.21
VPS41P38959 NUP188YML103C 4968 nt1.26□□□□□ -2.21
VPS41P38959 ATP8Q0080 147 nt1.25□□□□□ -2.21
VPS41P38959 YHL015W-AYHL015W-A 84 nt1.25□□□□□ -2.21
VPS41P38959 PRP5YBR237W 2550 nt1.25□□□□□ -2.21
VPS41P38959 YLL020CYLL020C 306 nt1.24□□□□□ -2.21
VPS41P38959 YER053C-AYER053C-A 114 nt1.23□□□□□ -2.21
VPS41P38959 YKL100W-AYKL100W-A 90 nt1.23□□□□□ -2.21
VPS41P38959 YOR161W-AYOR161W-A 81 nt1.23□□□□□ -2.21
VPS41P38959 VAM6YDL077C 3150 nt1.23□□□□□ -2.21
VPS41P38959 NUP145YGL092W 3954 nt1.23□□□□□ -2.21
VPS41P38959 NOP9YJL010C 2001 nt1.23□□□□□ -2.21
VPS41P38959 YNL284C-BYNL284C-B 5268 nt1.22□□□□□ -2.21
VPS41P38959 tH(GUG)E1tH(GUG)E1 72 nt1.22□□□□□ -2.21
VPS41P38959 tH(GUG)E2tH(GUG)E2 72 nt1.22□□□□□ -2.21
VPS41P38959 tH(GUG)G1tH(GUG)G1 72 nt1.22□□□□□ -2.21
VPS41P38959 tH(GUG)G2tH(GUG)G2 72 nt1.22□□□□□ -2.21
VPS41P38959 tH(GUG)HtH(GUG)H 72 nt1.22□□□□□ -2.21
VPS41P38959 tH(GUG)KtH(GUG)K 72 nt1.22□□□□□ -2.21
VPS41P38959 tH(GUG)MtH(GUG)M 72 nt1.22□□□□□ -2.21
VPS41P38959 PRP42YDR235W 1635 nt1.22□□□□□ -2.21
VPS41P38959 SPT7YBR081C 3999 nt1.21□□□□□ -2.22
VPS41P38959 ANS1YHR126C 480 nt1.21□□□□□ -2.22
VPS41P38959 YBL053WYBL053W 375 nt1.21□□□□□ -2.22
VPS41P38959 BEM2YER155C 6504 nt1.21□□□□□ -2.22
VPS41P38959 NST1YNL091W 3723 nt1.21□□□□□ -2.22
VPS41P38959 YLR282CYLR282C 342 nt1.2□□□□□ -2.22
VPS41P38959 YNL170WYNL170W 396 nt1.2□□□□□ -2.22
VPS41P38959 RPL26BYGR034W 384 nt1.19□□□□□ -2.22
VPS41P38959 COX5BYIL111W 456 nt1.19□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 33.1 ms